Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 MIR659-201ENST00000384963 97 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USP41Q3LFD5 AL603865.2-201ENST00000401679 213 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.88□□□□□ -1.63
USP41Q3LFD5 EIF4HP2-201ENST00000424380 563 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.88□□□□□ -1.63
USP41Q3LFD5 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.88□□□□□ -1.63
USP41Q3LFD5 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.88□□□□□ -1.63
USP41Q3LFD5 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.88□□□□□ -1.63
USP41Q3LFD5 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.88□□□□□ -1.63
USP41Q3LFD5 AC011998.1-201ENST00000433403 117 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 FTH1P16-201ENST00000435241 552 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.88□□□□□ -1.63
USP41Q3LFD5 AC004854.1-201ENST00000440356 349 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 RPL23AP93-201ENST00000440847 484 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 HSFY3P-201ENST00000444242 1191 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.88□□□□□ -1.63
USP41Q3LFD5 AL591363.1-201ENST00000450091 483 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 AL035407.2-201ENST00000454090 378 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 AC104687.1-201ENST00000485829 412 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 RN7SL810P-201ENST00000493031 276 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
USP41Q3LFD5 SNORA19.3-201ENST00000516165 130 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.88□□□□□ -1.63
USP41Q3LFD5 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USP41Q3LFD5 SULT1C2P2-201ENST00000562517 294 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USP41Q3LFD5 AL606834.3-201ENST00000602615 496 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 AC018754.1-201ENST00000607486 925 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 AC091979.2-201ENST00000607514 214 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 OR2BH1P-201ENST00000608850 864 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 AL121890.2-201ENST00000617644 465 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.88□□□□□ -1.63
USP41Q3LFD5 AL590396.4-201ENST00000636779 956 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 LINC01808-202ENST00000641680 1116 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 AC107068.1-201ENST00000563286 4218 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USP41Q3LFD5 CASC19-204ENST00000641001 2055 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
USP41Q3LFD5 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.88□□□□□ -1.63
USP41Q3LFD5 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
USP41Q3LFD5 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
USP41Q3LFD5 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
USP41Q3LFD5 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USP41Q3LFD5 MFSD8-220ENST00000641243 1422 ntBASIC4.88□□□□□ -1.63
USP41Q3LFD5 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USP41Q3LFD5 AC104118.1-201ENST00000607625 1589 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USP41Q3LFD5 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP41Q3LFD5 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP41Q3LFD5 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP41Q3LFD5 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USP41Q3LFD5 IL6STP1-201ENST00000346911 1020 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 RNU5B-1-201ENST00000363286 116 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 OR6C69P-201ENST00000394268 893 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 RNA5SP146-201ENST00000410743 123 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 VN1R51P-201ENST00000411675 945 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 TCEA1P4-201ENST00000415066 844 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 MTCO2P23-201ENST00000425216 680 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 AC004975.1-201ENST00000428733 208 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 RPS29P17-201ENST00000430795 166 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 AC000041.1-201ENST00000439655 175 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 FHP1-201ENST00000442741 703 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 ISCUP1-201ENST00000454451 448 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 GTF2IP12-201ENST00000456547 356 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 RN7SL303P-201ENST00000469773 251 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 RPS4XP6-201ENST00000477670 797 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 UBE2V1P12-201ENST00000503954 474 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 AC111193.1-201ENST00000504097 155 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 AC021146.3-201ENST00000511911 260 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 RNU6-276P-201ENST00000516114 96 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 RNA5SP249-201ENST00000516127 99 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 AC134698.5-201ENST00000519444 336 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 OR7E13P-201ENST00000526052 910 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 MIR3939-201ENST00000582614 106 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 AC096586.1-201ENST00000610267 561 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 AC068831.8-201ENST00000620171 435 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP41Q3LFD5 AC093311.1-201ENST00000506586 2021 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.87□□□□□ -1.63
USP41Q3LFD5 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP41Q3LFD5 ZNF849P-201ENST00000594711 1566 ntBASIC4.87□□□□□ -1.63
USP41Q3LFD5 AL391684.1-202ENST00000641293 1636 ntBASIC4.86□□□□□ -1.63
USP41Q3LFD5 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
USP41Q3LFD5 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms