Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LSM3P62310 RPL12P25-202ENST00000598100 674 ntBASIC3.33□□□□□ -1.88
LSM3P62310 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.33□□□□□ -1.88
LSM3P62310 AC073530.2-201ENST00000623987 261 ntBASIC3.33□□□□□ -1.88
LSM3P62310 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.33□□□□□ -1.88
LSM3P62310 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LSM3P62310 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM3P62310 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LSM3P62310 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LSM3P62310 DHX40P1-201ENST00000588725 1412 ntBASIC3.33□□□□□ -1.88
LSM3P62310 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
LSM3P62310 ASNSP1-201ENST00000518311 1939 ntBASIC3.32□□□□□ -1.88
LSM3P62310 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM3P62310 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.32□□□□□ -1.88
LSM3P62310 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM3P62310 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM3P62310 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LSM3P62310 RNU6-178P-201ENST00000384631 104 ntBASIC3.32□□□□□ -1.88
LSM3P62310 AC093719.1-202ENST00000392735 373 ntBASIC3.32□□□□□ -1.88
LSM3P62310 AL161909.1-201ENST00000397390 712 ntBASIC3.32□□□□□ -1.88
LSM3P62310 AL109941.1-201ENST00000401925 229 ntBASIC3.32□□□□□ -1.88
LSM3P62310 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.32□□□□□ -1.88
LSM3P62310 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.32□□□□□ -1.88
LSM3P62310 RPS7P13-201ENST00000413955 498 ntBASIC3.32□□□□□ -1.88
LSM3P62310 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.32□□□□□ -1.88
LSM3P62310 AC079355.1-201ENST00000421770 223 ntBASIC3.32□□□□□ -1.88
LSM3P62310 AC006989.1-201ENST00000427212 131 ntBASIC3.32□□□□□ -1.88
LSM3P62310 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM3P62310 TBCAP1-201ENST00000436520 327 ntBASIC3.32□□□□□ -1.88
LSM3P62310 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LSM3P62310 MTND2P28-201ENST00000457540 1044 ntBASIC3.32□□□□□ -1.88
LSM3P62310 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM3P62310 AC108941.1-201ENST00000502853 530 ntBASIC3.32□□□□□ -1.88
LSM3P62310 AC020593.1-201ENST00000507399 299 ntBASIC3.32□□□□□ -1.88
LSM3P62310 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.32□□□□□ -1.88
LSM3P62310 IGLVIV-64-201ENST00000518581 301 ntBASIC3.32□□□□□ -1.88
LSM3P62310 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.32□□□□□ -1.88
LSM3P62310 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM3P62310 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LSM3P62310 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM3P62310 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.32□□□□□ -1.88
LSM3P62310 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM3P62310 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
LSM3P62310 NPM1P47-201ENST00000560843 856 ntBASIC3.32□□□□□ -1.88
LSM3P62310 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM3P62310 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM3P62310 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LSM3P62310 AC092628.2-201ENST00000622492 339 ntBASIC3.32□□□□□ -1.88
LSM3P62310 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LSM3P62310 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM3P62310 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM3P62310 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
LSM3P62310 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM3P62310 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM3P62310 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM3P62310 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM3P62310 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM3P62310 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM3P62310 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LSM3P62310 SAGE2P-201ENST00000420011 2126 ntBASIC3.31□□□□□ -1.88
LSM3P62310 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM3P62310 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LSM3P62310 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LSM3P62310 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LSM3P62310 MIR621-201ENST00000384919 96 ntBASIC3.31□□□□□ -1.88
LSM3P62310 NCSTNP1-201ENST00000406229 144 ntBASIC3.31□□□□□ -1.88
LSM3P62310 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM3P62310 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.31□□□□□ -1.88
LSM3P62310 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.31□□□□□ -1.88
LSM3P62310 TCEA1P2-201ENST00000420496 906 ntBASIC3.31□□□□□ -1.88
LSM3P62310 SEC63P1-201ENST00000425785 1258 ntBASIC3.31□□□□□ -1.88
LSM3P62310 RPS29P17-201ENST00000430795 166 ntBASIC3.31□□□□□ -1.88
LSM3P62310 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LSM3P62310 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
LSM3P62310 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.31□□□□□ -1.88
LSM3P62310 RPS3AP46-201ENST00000448352 682 ntBASIC3.31□□□□□ -1.88
LSM3P62310 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM3P62310 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM3P62310 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM3P62310 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.31□□□□□ -1.88
LSM3P62310 CYCSP20-201ENST00000473154 315 ntBASIC3.31□□□□□ -1.88
LSM3P62310 AP000893.1-201ENST00000474462 794 ntBASIC3.31□□□□□ -1.88
LSM3P62310 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.31□□□□□ -1.88
LSM3P62310 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM3P62310 RPL23AP73-201ENST00000492507 471 ntBASIC3.31□□□□□ -1.88
LSM3P62310 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM3P62310 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM3P62310 AC008802.1-201ENST00000519121 791 ntBASIC3.31□□□□□ -1.88
LSM3P62310 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM3P62310 DEFB109D-201ENST00000529497 240 ntBASIC3.31□□□□□ -1.88
LSM3P62310 BRD9P1-201ENST00000529855 560 ntBASIC3.31□□□□□ -1.88
LSM3P62310 TRAV15-201ENST00000556680 249 ntBASIC3.31□□□□□ -1.88
LSM3P62310 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.31□□□□□ -1.88
LSM3P62310 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM3P62310 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM3P62310 AC008507.1-201ENST00000587506 734 ntBASIC3.31□□□□□ -1.88
LSM3P62310 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.31□□□□□ -1.88
LSM3P62310 AC133644.2-201ENST00000608142 540 ntBASIC3.31□□□□□ -1.88
LSM3P62310 AL135786.2-201ENST00000608422 615 ntBASIC3.31□□□□□ -1.88
LSM3P62310 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms