Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC011330.2-201ENST00000621680 635 ntBASIC5.28□□□□□ -1.56
NEK3P51956 AP000843.1-201ENST00000624880 701 ntBASIC5.28□□□□□ -1.56
NEK3P51956 AC135068.12-201ENST00000637370 931 ntBASIC5.28□□□□□ -1.56
NEK3P51956 FAM157B-203ENST00000639350 358 ntBASIC5.28□□□□□ -1.56
NEK3P51956 LINC01739-205ENST00000641890 573 ntBASIC5.28□□□□□ -1.56
NEK3P51956 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NEK3P51956 HSPA8P18-201ENST00000439846 1928 ntBASIC5.28□□□□□ -1.56
NEK3P51956 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
NEK3P51956 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NEK3P51956 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NEK3P51956 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NEK3P51956 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
NEK3P51956 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NEK3P51956 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NEK3P51956 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
NEK3P51956 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.27□□□□□ -1.57
NEK3P51956 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
NEK3P51956 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
NEK3P51956 Y_RNA.465-201ENST00000384293 102 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.27□□□□□ -1.57
NEK3P51956 NUDT19P3-201ENST00000404698 555 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AL590084.1-201ENST00000407885 387 ntBASIC5.27□□□□□ -1.57
NEK3P51956 RN7SKP247-201ENST00000411094 308 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.27□□□□□ -1.57
NEK3P51956 AC007738.1-201ENST00000413892 348 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AC073136.2-201ENST00000417282 849 ntBASIC5.27□□□□□ -1.57
NEK3P51956 BOLA3P4-201ENST00000418151 400 ntBASIC5.27□□□□□ -1.57
NEK3P51956 RPL21P43-201ENST00000425440 472 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AC096632.1-201ENST00000427395 310 ntBASIC5.27□□□□□ -1.57
NEK3P51956 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NEK3P51956 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.27□□□□□ -1.57
NEK3P51956 BTF3P6-201ENST00000448054 499 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.27□□□□□ -1.57
NEK3P51956 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.27□□□□□ -1.57
NEK3P51956 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.27□□□□□ -1.57
NEK3P51956 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.27□□□□□ -1.57
NEK3P51956 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.27□□□□□ -1.57
NEK3P51956 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.27□□□□□ -1.57
NEK3P51956 AC087879.1-201ENST00000474343 374 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AC104971.1-201ENST00000495117 578 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.27□□□□□ -1.57
NEK3P51956 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.27□□□□□ -1.57
NEK3P51956 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.27□□□□□ -1.57
NEK3P51956 AC018797.3-201ENST00000513388 1241 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.27□□□□□ -1.57
NEK3P51956 MTCO1P30-201ENST00000515244 580 ntBASIC5.27□□□□□ -1.57
NEK3P51956 RNU6-1225P-201ENST00000516336 65 ntBASIC5.27□□□□□ -1.57
NEK3P51956 RN7SKP66-201ENST00000516681 231 ntBASIC5.27□□□□□ -1.57
NEK3P51956 Y_RNA.717-201ENST00000517106 92 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.27□□□□□ -1.57
NEK3P51956 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.27□□□□□ -1.57
NEK3P51956 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
NEK3P51956 AC005832.3-201ENST00000537929 631 ntBASIC5.27□□□□□ -1.57
NEK3P51956 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NEK3P51956 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
NEK3P51956 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.27□□□□□ -1.57
NEK3P51956 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.27□□□□□ -1.57
NEK3P51956 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.27□□□□□ -1.57
NEK3P51956 AC011447.4-201ENST00000587562 111 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AL162431.4-201ENST00000604674 411 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.27□□□□□ -1.57
NEK3P51956 AC005332.6-201ENST00000613178 446 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AC140725.3-201ENST00000616193 880 ntBASIC5.27□□□□□ -1.57
NEK3P51956 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.27□□□□□ -1.57
NEK3P51956 MIR6730-201ENST00000622213 67 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AP002799.1-201ENST00000623552 423 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AP000648.2-201ENST00000624182 404 ntBASIC5.27□□□□□ -1.57
NEK3P51956 MKKS-204ENST00000639674 192 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AL672167.1-205ENST00000641112 3080 ntBASIC5.27□□□□□ -1.57
NEK3P51956 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NEK3P51956 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NEK3P51956 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.27□□□□□ -1.57
NEK3P51956 AL450345.1-202ENST00000605741 3881 ntBASIC5.27□□□□□ -1.57
NEK3P51956 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.27□□□□□ -1.57
NEK3P51956 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NEK3P51956 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.27□□□□□ -1.57
NEK3P51956 Z95331.1-201ENST00000623075 23112 ntBASIC5.26□□□□□ -1.57
NEK3P51956 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NEK3P51956 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.26□□□□□ -1.57
NEK3P51956 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NEK3P51956 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NEK3P51956 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NEK3P51956 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NEK3P51956 AC017079.1-201ENST00000333650 415 ntBASIC5.26□□□□□ -1.57
NEK3P51956 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NEK3P51956 RNU6-441P-201ENST00000384545 106 ntBASIC5.26□□□□□ -1.57
NEK3P51956 RNU6-1242P-201ENST00000391052 103 ntBASIC5.26□□□□□ -1.57
NEK3P51956 OR8V1P-201ENST00000395193 873 ntBASIC5.26□□□□□ -1.57
NEK3P51956 AC119751.3-201ENST00000399720 670 ntBASIC5.26□□□□□ -1.57
NEK3P51956 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.26□□□□□ -1.57
NEK3P51956 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.26□□□□□ -1.57
NEK3P51956 SKP1P3-201ENST00000429280 487 ntBASIC5.26□□□□□ -1.57
NEK3P51956 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.26□□□□□ -1.57
NEK3P51956 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.26□□□□□ -1.57
NEK3P51956 RPS27P18-201ENST00000431701 247 ntBASIC5.26□□□□□ -1.57
NEK3P51956 RPL7AP61-201ENST00000443410 636 ntBASIC5.26□□□□□ -1.57
NEK3P51956 BX842559.2-201ENST00000451418 605 ntBASIC5.26□□□□□ -1.57
NEK3P51956 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.26□□□□□ -1.57
NEK3P51956 BX284632.1-201ENST00000478218 541 ntBASIC5.26□□□□□ -1.57
NEK3P51956 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms