Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC234782.5-201ENST00000617723 324 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AC073593.1-201ENST00000624500 411 ntBASIC4.55□□□□□ -1.68
SOX2P48431 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SOX2P48431 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.55□□□□□ -1.68
SOX2P48431 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.55□□□□□ -1.68
SOX2P48431 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SOX2P48431 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SOX2P48431 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SOX2P48431 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SOX2P48431 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
SOX2P48431 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SOX2P48431 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SOX2P48431 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.55□□□□□ -1.68
SOX2P48431 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.55□□□□□ -1.68
SOX2P48431 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SOX2P48431 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.55□□□□□ -1.68
SOX2P48431 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SOX2P48431 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.55□□□□□ -1.68
SOX2P48431 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.55□□□□□ -1.68
SOX2P48431 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.54□□□□□ -1.68
SOX2P48431 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AC107982.1-201ENST00000507171 1300 ntBASIC4.54□□□□□ -1.68
SOX2P48431 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.54□□□□□ -1.68
SOX2P48431 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 AC091305.2-201ENST00000624049 1576 ntBASIC4.54□□□□□ -1.68
SOX2P48431 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SOX2P48431 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 MIR133B-201ENST00000362210 119 ntBASIC4.54□□□□□ -1.68
SOX2P48431 RNA5SP46-201ENST00000362370 120 ntBASIC4.54□□□□□ -1.68
SOX2P48431 RNU6-492P-201ENST00000363035 104 ntBASIC4.54□□□□□ -1.68
SOX2P48431 SNORA4.1-201ENST00000364263 144 ntBASIC4.54□□□□□ -1.68
SOX2P48431 SUGT1P1-201ENST00000379514 476 ntBASIC4.54□□□□□ -1.68
SOX2P48431 SNORD116-23-201ENST00000384645 92 ntBASIC4.54□□□□□ -1.68
SOX2P48431 RNU6-1151P-201ENST00000384684 107 ntBASIC4.54□□□□□ -1.68
SOX2P48431 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SOX2P48431 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 NPM1P40-201ENST00000412758 733 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AC007738.1-201ENST00000413892 348 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.54□□□□□ -1.68
SOX2P48431 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 AC012519.1-201ENST00000424588 610 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.54□□□□□ -1.68
SOX2P48431 KCTD10P1-201ENST00000434203 625 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AC008072.1-201ENST00000434254 824 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AL161722.2-201ENST00000434731 981 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AC004865.1-201ENST00000442276 1003 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.54□□□□□ -1.68
SOX2P48431 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.54□□□□□ -1.68
SOX2P48431 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.54□□□□□ -1.68
SOX2P48431 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 DDX39BP2-208ENST00000453923 258 ntBASIC4.54□□□□□ -1.68
SOX2P48431 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 MTCO3P16-201ENST00000454456 754 ntBASIC4.54□□□□□ -1.68
SOX2P48431 RN7SL51P-201ENST00000468230 285 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.54□□□□□ -1.68
SOX2P48431 AC112198.1-201ENST00000505369 1220 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.54□□□□□ -1.68
SOX2P48431 HSPE1P23-201ENST00000509838 286 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AC006427.1-201ENST00000514359 712 ntBASIC4.54□□□□□ -1.68
SOX2P48431 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.54□□□□□ -1.68
SOX2P48431 RPL12P22-201ENST00000519073 490 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.54□□□□□ -1.68
SOX2P48431 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.54□□□□□ -1.68
SOX2P48431 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.54□□□□□ -1.68
SOX2P48431 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.54□□□□□ -1.68
SOX2P48431 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 AC007115.1-201ENST00000546853 234 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 AC068714.1-201ENST00000559623 800 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.54□□□□□ -1.68
SOX2P48431 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.54□□□□□ -1.68
SOX2P48431 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.54□□□□□ -1.68
SOX2P48431 AC006270.3-201ENST00000605967 1036 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.54□□□□□ -1.68
SOX2P48431 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 AL158063.1-201ENST00000615349 536 ntBASIC4.54□□□□□ -1.68
SOX2P48431 BX005214.3-202ENST00000619809 325 ntBASIC4.54□□□□□ -1.68
SOX2P48431 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 MKKS-204ENST00000639674 192 ntBASIC4.54□□□□□ -1.68
SOX2P48431 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SOX2P48431 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
SOX2P48431 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms