Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.01□□□□□ -1.77
CXCL12P48061 AC087499.8-201ENST00000578406 226 ntBASIC4.01□□□□□ -1.77
CXCL12P48061 AC005412.1-201ENST00000580812 1049 ntBASIC4.01□□□□□ -1.77
CXCL12P48061 ZNF415P1-201ENST00000582279 1166 ntBASIC4.01□□□□□ -1.77
CXCL12P48061 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.01□□□□□ -1.77
CXCL12P48061 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.01□□□□□ -1.77
CXCL12P48061 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.01□□□□□ -1.77
CXCL12P48061 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.01□□□□□ -1.77
CXCL12P48061 MIR432-201ENST00000606207 94 ntBASIC4.01□□□□□ -1.77
CXCL12P48061 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.01□□□□□ -1.77
CXCL12P48061 AP005212.4-201ENST00000614206 710 ntBASIC4.01□□□□□ -1.77
CXCL12P48061 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.01□□□□□ -1.77
CXCL12P48061 AL133268.1-201ENST00000405676 1401 ntBASIC4.01□□□□□ -1.77
CXCL12P48061 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CXCL12P48061 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.01□□□□□ -1.77
CXCL12P48061 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL12P48061 MTND5P1-201ENST00000445440 1375 ntBASIC4.01□□□□□ -1.77
CXCL12P48061 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4□□□□□ -1.77
CXCL12P48061 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CXCL12P48061 AL672167.1-203ENST00000641299 2975 ntBASIC4□□□□□ -1.77
CXCL12P48061 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4□□□□□ -1.77
CXCL12P48061 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4□□□□□ -1.77
CXCL12P48061 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CXCL12P48061 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4□□□□□ -1.77
CXCL12P48061 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4□□□□□ -1.77
CXCL12P48061 SNORA68.2-201ENST00000391263 128 ntBASIC4□□□□□ -1.77
CXCL12P48061 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CXCL12P48061 HMGB3P19-201ENST00000403971 560 ntBASIC4□□□□□ -1.77
CXCL12P48061 AL139039.2-201ENST00000407436 479 ntBASIC4□□□□□ -1.77
CXCL12P48061 UBE2Q2P12-201ENST00000414573 204 ntBASIC4□□□□□ -1.77
CXCL12P48061 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4□□□□□ -1.77
CXCL12P48061 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4□□□□□ -1.77
CXCL12P48061 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4□□□□□ -1.77
CXCL12P48061 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4□□□□□ -1.77
CXCL12P48061 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4□□□□□ -1.77
CXCL12P48061 EIF4A1P1-201ENST00000420241 934 ntBASIC4□□□□□ -1.77
CXCL12P48061 AL035423.1-201ENST00000420331 213 ntBASIC4□□□□□ -1.77
CXCL12P48061 RPL36AP10-201ENST00000421785 322 ntBASIC4□□□□□ -1.77
CXCL12P48061 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4□□□□□ -1.77
CXCL12P48061 HSPD1P21-201ENST00000436541 245 ntBASIC4□□□□□ -1.77
CXCL12P48061 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4□□□□□ -1.77
CXCL12P48061 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4□□□□□ -1.77
CXCL12P48061 MTND6P5-201ENST00000448266 512 ntBASIC4□□□□□ -1.77
CXCL12P48061 AC104849.1-201ENST00000462623 405 ntBASIC4□□□□□ -1.77
CXCL12P48061 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4□□□□□ -1.77
CXCL12P48061 UBE2CP3-201ENST00000502715 450 ntBASIC4□□□□□ -1.77
CXCL12P48061 AC113398.2-201ENST00000507630 558 ntBASIC4□□□□□ -1.77
CXCL12P48061 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4□□□□□ -1.77
CXCL12P48061 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4□□□□□ -1.77
CXCL12P48061 RNU7-143P-201ENST00000516781 65 ntBASIC4□□□□□ -1.77
CXCL12P48061 NDUFA5P2-201ENST00000519723 344 ntBASIC4□□□□□ -1.77
CXCL12P48061 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4□□□□□ -1.77
CXCL12P48061 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
CXCL12P48061 DEFB109D-201ENST00000529497 240 ntBASIC4□□□□□ -1.77
CXCL12P48061 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4□□□□□ -1.77
CXCL12P48061 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4□□□□□ -1.77
CXCL12P48061 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4□□□□□ -1.77
CXCL12P48061 AC114878.2-201ENST00000604863 1251 ntBASIC4□□□□□ -1.77
CXCL12P48061 AL049634.3-201ENST00000604968 457 ntBASIC4□□□□□ -1.77
CXCL12P48061 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4□□□□□ -1.77
CXCL12P48061 AL138721.1-201ENST00000616756 179 ntBASIC4□□□□□ -1.77
CXCL12P48061 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4□□□□□ -1.77
CXCL12P48061 AP005264.7-201ENST00000625003 745 ntBASIC4□□□□□ -1.77
CXCL12P48061 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4□□□□□ -1.77
CXCL12P48061 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CXCL12P48061 AC087190.4-201ENST00000574616 8334 ntBASIC4□□□□□ -1.77
CXCL12P48061 MTCO1P22-201ENST00000604619 1360 ntBASIC4□□□□□ -1.77
CXCL12P48061 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4□□□□□ -1.77
CXCL12P48061 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL12P48061 MAPK10-349ENST00000641767 3661 ntBASIC3.99□□□□□ -1.77
CXCL12P48061 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL12P48061 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL12P48061 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL12P48061 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL12P48061 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.99□□□□□ -1.77
CXCL12P48061 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL12P48061 AL450992.3-201ENST00000413192 568 ntBASIC3.99□□□□□ -1.77
CXCL12P48061 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.99□□□□□ -1.77
CXCL12P48061 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL12P48061 AL591419.1-201ENST00000427423 339 ntBASIC3.99□□□□□ -1.77
CXCL12P48061 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL12P48061 CYCSP43-201ENST00000438233 310 ntBASIC3.99□□□□□ -1.77
CXCL12P48061 RPL23AP89-201ENST00000439324 255 ntBASIC3.99□□□□□ -1.77
CXCL12P48061 HMGB3P9-201ENST00000441799 583 ntBASIC3.99□□□□□ -1.77
CXCL12P48061 AL031584.1-201ENST00000447169 754 ntBASIC3.99□□□□□ -1.77
CXCL12P48061 RPL21P11-201ENST00000461458 483 ntBASIC3.99□□□□□ -1.77
CXCL12P48061 AC012158.1-204ENST00000483430 465 ntBASIC3.99□□□□□ -1.77
CXCL12P48061 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL12P48061 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL12P48061 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL12P48061 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.99□□□□□ -1.77
CXCL12P48061 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.99□□□□□ -1.77
CXCL12P48061 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL12P48061 AC037471.2-201ENST00000564941 598 ntBASIC3.99□□□□□ -1.77
CXCL12P48061 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.99□□□□□ -1.77
CXCL12P48061 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL12P48061 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL12P48061 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL12P48061 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL12P48061 AC097505.1-201ENST00000610199 565 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms