Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HOXA11P31270 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXA11P31270 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXA11P31270 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.96□□□□□ -1.62
HOXA11P31270 ZNF90P1-201ENST00000480493 1951 ntBASIC4.96□□□□□ -1.62
HOXA11P31270 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXA11P31270 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXA11P31270 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HOXA11P31270 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.96□□□□□ -1.62
HOXA11P31270 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HOXA11P31270 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA11P31270 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA11P31270 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA11P31270 MTND4P8-201ENST00000514997 1362 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXA11P31270 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA11P31270 RNU5B-4P-201ENST00000363508 111 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 RNA5SP509-201ENST00000364577 119 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA11P31270 AL158825.1-201ENST00000414735 521 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 LUZP4P1-201ENST00000415420 344 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA11P31270 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA11P31270 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA11P31270 AC234779.1-201ENST00000425910 285 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 FO393414.1-201ENST00000428697 1184 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA11P31270 RPS6P15-201ENST00000431996 751 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 BX119904.1-201ENST00000432026 348 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA11P31270 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA11P31270 AL627224.1-201ENST00000448334 444 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 RPL23AP24-201ENST00000458203 385 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 RPS4XP12-201ENST00000461747 709 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA11P31270 AC020890.1-201ENST00000491837 504 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXA11P31270 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA11P31270 PGBD4P4-201ENST00000509673 613 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA11P31270 AC091163.3-201ENST00000518269 1144 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA11P31270 OR8A2P-201ENST00000528631 952 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA11P31270 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA11P31270 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA11P31270 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.95□□□□□ -1.62
HOXA11P31270 AC009852.2-201ENST00000567898 485 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA11P31270 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA11P31270 AC010200.2-201ENST00000605098 235 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 AC080013.6-201ENST00000606185 215 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 AC009704.2-201ENST00000618739 483 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA11P31270 AC083865.1-201ENST00000636634 831 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 OR52H1-202ENST00000641796 1061 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA11P31270 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA11P31270 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA11P31270 CPHL1P-201ENST00000461341 3407 ntBASIC4.95□□□□□ -1.62
HOXA11P31270 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
HOXA11P31270 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXA11P31270 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HOXA11P31270 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HOXA11P31270 AC021242.1-201ENST00000507315 2035 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA11P31270 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA11P31270 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA11P31270 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXA11P31270 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA11P31270 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA11P31270 SNORA70.2-201ENST00000364506 135 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 KRR1P1-201ENST00000419430 803 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 RAD23BP1-201ENST00000421404 1227 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXA11P31270 NMNAT1P2-201ENST00000435192 860 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXA11P31270 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA11P31270 GTF3AP5-201ENST00000442645 697 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXA11P31270 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 AC004263.1-201ENST00000479327 332 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXA11P31270 AC083829.1-201ENST00000503756 657 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXA11P31270 CDH12P2-201ENST00000504393 298 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXA11P31270 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXA11P31270 RN7SKP122-201ENST00000515923 296 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 RNU6-276P-201ENST00000516114 96 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 AC004923.2-201ENST00000529649 369 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.94□□□□□ -1.62
HOXA11P31270 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXA11P31270 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXA11P31270 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXA11P31270 AC027455.1-201ENST00000574104 594 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 AP000919.1-202ENST00000581139 1264 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 SS18L2P2-201ENST00000583960 235 ntBASIC4.94□□□□□ -1.62
HOXA11P31270 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXA11P31270 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms