Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.03□□□□□ -1.76
SHC1P29353 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.03□□□□□ -1.76
SHC1P29353 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.03□□□□□ -1.76
SHC1P29353 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.03□□□□□ -1.76
SHC1P29353 AC008507.2-201ENST00000588402 1176 ntBASIC4.03□□□□□ -1.76
SHC1P29353 MTCO2P2-201ENST00000591258 225 ntBASIC4.03□□□□□ -1.76
SHC1P29353 BPIFA4P-203ENST00000603168 689 ntBASIC4.03□□□□□ -1.76
SHC1P29353 AC015849.2-201ENST00000605738 409 ntBASIC4.03□□□□□ -1.76
SHC1P29353 AP002360.3-201ENST00000607673 710 ntBASIC4.03□□□□□ -1.76
SHC1P29353 AL138721.1-201ENST00000616756 179 ntBASIC4.03□□□□□ -1.76
SHC1P29353 MIR6891-201ENST00000618788 93 ntBASIC4.03□□□□□ -1.76
SHC1P29353 AP000484.1-201ENST00000620067 1252 ntBASIC4.03□□□□□ -1.76
SHC1P29353 AC006065.6-201ENST00000625201 545 ntBASIC4.03□□□□□ -1.76
SHC1P29353 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.03□□□□□ -1.76
SHC1P29353 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHC1P29353 AC107027.3-201ENST00000565095 3473 ntBASIC4.03□□□□□ -1.76
SHC1P29353 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHC1P29353 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.03□□□□□ -1.76
SHC1P29353 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHC1P29353 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SHC1P29353 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.03□□□□□ -1.76
SHC1P29353 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
SHC1P29353 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.03□□□□□ -1.77
SHC1P29353 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.02□□□□□ -1.77
SHC1P29353 AC139713.2-214ENST00000642059 1811 ntBASIC4.02□□□□□ -1.77
SHC1P29353 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.02□□□□□ -1.77
SHC1P29353 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHC1P29353 SEPT7P7-201ENST00000420492 1301 ntBASIC4.02□□□□□ -1.77
SHC1P29353 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.02□□□□□ -1.77
SHC1P29353 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.02□□□□□ -1.77
SHC1P29353 AC008033.1-201ENST00000216407 1162 ntBASIC4.02□□□□□ -1.77
SHC1P29353 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHC1P29353 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SHC1P29353 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHC1P29353 IGKV7-3-201ENST00000357453 298 ntBASIC4.02□□□□□ -1.77
SHC1P29353 MIR448-201ENST00000362131 111 ntBASIC4.02□□□□□ -1.77
SHC1P29353 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.02□□□□□ -1.77
SHC1P29353 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SHC1P29353 RNU1-44P-201ENST00000384453 163 ntBASIC4.02□□□□□ -1.77
SHC1P29353 RPL22P22-201ENST00000395439 379 ntBASIC4.02□□□□□ -1.77
SHC1P29353 SDHCP2-201ENST00000398565 501 ntBASIC4.02□□□□□ -1.77
SHC1P29353 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHC1P29353 BX664727.1-201ENST00000416024 466 ntBASIC4.02□□□□□ -1.77
SHC1P29353 AL606495.1-201ENST00000422100 813 ntBASIC4.02□□□□□ -1.77
SHC1P29353 RPS27AP7-201ENST00000422792 455 ntBASIC4.02□□□□□ -1.77
SHC1P29353 RPS12P5-201ENST00000423449 371 ntBASIC4.02□□□□□ -1.77
SHC1P29353 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.02□□□□□ -1.77
SHC1P29353 FO393414.1-201ENST00000428697 1184 ntBASIC4.02□□□□□ -1.77
SHC1P29353 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.02□□□□□ -1.77
SHC1P29353 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.02□□□□□ -1.77
SHC1P29353 AL606490.7-201ENST00000433136 191 ntBASIC4.02□□□□□ -1.77
SHC1P29353 HLA-N-201ENST00000437516 135 ntBASIC4.02□□□□□ -1.77
SHC1P29353 AC006994.1-201ENST00000438212 839 ntBASIC4.02□□□□□ -1.77
SHC1P29353 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.02□□□□□ -1.77
SHC1P29353 GEMIN8P3-201ENST00000445417 720 ntBASIC4.02□□□□□ -1.77
SHC1P29353 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.02□□□□□ -1.77
SHC1P29353 MTND1P31-201ENST00000449206 961 ntBASIC4.02□□□□□ -1.77
SHC1P29353 BUD31P2-201ENST00000449374 300 ntBASIC4.02□□□□□ -1.77
SHC1P29353 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.02□□□□□ -1.77
SHC1P29353 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.02□□□□□ -1.77
SHC1P29353 HMGB1P38-201ENST00000490557 577 ntBASIC4.02□□□□□ -1.77
SHC1P29353 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.02□□□□□ -1.77
SHC1P29353 RPS27AP16-201ENST00000492222 470 ntBASIC4.02□□□□□ -1.77
SHC1P29353 AC021087.2-201ENST00000504656 1203 ntBASIC4.02□□□□□ -1.77
SHC1P29353 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.02□□□□□ -1.77
SHC1P29353 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHC1P29353 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.02□□□□□ -1.77
SHC1P29353 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.02□□□□□ -1.77
SHC1P29353 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.02□□□□□ -1.77
SHC1P29353 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.02□□□□□ -1.77
SHC1P29353 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.02□□□□□ -1.77
SHC1P29353 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.02□□□□□ -1.77
SHC1P29353 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.02□□□□□ -1.77
SHC1P29353 MTND3P12-201ENST00000559068 328 ntBASIC4.02□□□□□ -1.77
SHC1P29353 AC090888.2-201ENST00000559765 1144 ntBASIC4.02□□□□□ -1.77
SHC1P29353 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.02□□□□□ -1.77
SHC1P29353 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.02□□□□□ -1.77
SHC1P29353 AF230666.2-201ENST00000602328 725 ntBASIC4.02□□□□□ -1.77
SHC1P29353 AL160290.3-201ENST00000604869 165 ntBASIC4.02□□□□□ -1.77
SHC1P29353 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.02□□□□□ -1.77
SHC1P29353 AC124016.2-201ENST00000610058 665 ntBASIC4.02□□□□□ -1.77
SHC1P29353 AC087683.2-201ENST00000611384 326 ntBASIC4.02□□□□□ -1.77
SHC1P29353 AL121873.1-201ENST00000616013 524 ntBASIC4.02□□□□□ -1.77
SHC1P29353 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.02□□□□□ -1.77
SHC1P29353 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.02□□□□□ -1.77
SHC1P29353 AP005019.3-201ENST00000620418 560 ntBASIC4.02□□□□□ -1.77
SHC1P29353 AC090617.9-201ENST00000623751 147 ntBASIC4.02□□□□□ -1.77
SHC1P29353 AP002967.1-201ENST00000624203 539 ntBASIC4.02□□□□□ -1.77
SHC1P29353 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHC1P29353 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHC1P29353 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHC1P29353 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SHC1P29353 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.02□□□□□ -1.77
SHC1P29353 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHC1P29353 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.02□□□□□ -1.77
SHC1P29353 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHC1P29353 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.02□□□□□ -1.77
SHC1P29353 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.02□□□□□ -1.77
SHC1P29353 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.02□□□□□ -1.77
SHC1P29353 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms