Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN3P26045 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.56□□□□□ -1.68
PTPN3P26045 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN3P26045 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN3P26045 RNF2P1-201ENST00000442955 1010 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN3P26045 DDX39BP2-208ENST00000453923 258 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 AC005008.1-201ENST00000456151 612 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 FCF1P6-201ENST00000456841 595 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.56□□□□□ -1.68
PTPN3P26045 AC092905.1-201ENST00000467527 949 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 RPS17P11-201ENST00000474297 293 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN3P26045 AC021146.3-201ENST00000511911 260 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN3P26045 AC010476.1-201ENST00000519111 851 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 AC008562.1-201ENST00000521763 330 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN3P26045 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.56□□□□□ -1.68
PTPN3P26045 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN3P26045 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN3P26045 AC027104.1-201ENST00000563702 681 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN3P26045 AL160290.3-201ENST00000604869 165 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 AC026979.4-201ENST00000606555 645 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 STMN1P1-201ENST00000617809 440 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 FRG1HP-204ENST00000617940 757 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 MIR6891-201ENST00000618788 93 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 MIR7703-201ENST00000620784 77 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 AL049536.1-201ENST00000625043 744 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN3P26045 ATE1-AS1-202ENST00000636460 506 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 AL590396.2-201ENST00000636511 1041 ntBASIC4.56□□□□□ -1.68
PTPN3P26045 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN3P26045 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.56□□□□□ -1.68
PTPN3P26045 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.56□□□□□ -1.68
PTPN3P26045 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN3P26045 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
PTPN3P26045 DHX40P1-201ENST00000588725 1412 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN3P26045 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
PTPN3P26045 CASC19-261ENST00000641853 1638 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 OR4K15-201ENST00000305051 1216 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PTPN3P26045 IL6STP1-201ENST00000346911 1020 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 RNA5SP307-201ENST00000362863 116 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 RNA5SP27-201ENST00000363839 119 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN3P26045 HMGB3P18-201ENST00000406327 590 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN3P26045 UQCRBP1-201ENST00000421129 336 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN3P26045 AL354692.1-201ENST00000423044 315 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 AC013262.1-201ENST00000426710 252 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 AC092447.2-201ENST00000435487 669 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN3P26045 AC011753.3-201ENST00000443436 406 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PTPN3P26045 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN3P26045 RN7SL41P-201ENST00000476144 297 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 AP000827.1-201ENST00000527814 258 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN3P26045 AP006289.1-201ENST00000538089 277 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN3P26045 AP003717.3-201ENST00000544832 1180 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPN3P26045 OR4U1P-201ENST00000554958 912 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPN3P26045 AC068620.3-201ENST00000602749 560 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 AC125494.3-201ENST00000602759 455 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 AL008729.2-201ENST00000606393 473 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 AC097504.2-201ENST00000608088 454 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 AF129408.1-201ENST00000608767 431 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 AC116651.1-201ENST00000609724 556 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 AL391834.2-201ENST00000609982 546 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPN3P26045 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN3P26045 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPN3P26045 AP003476.1-201ENST00000623984 516 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.55□□□□□ -1.68
PTPN3P26045 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPN3P26045 U6.107-201ENST00000637108 79 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PTPN3P26045 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN3P26045 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN3P26045 SAGE2P-201ENST00000420011 2126 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN3P26045 NEAT1-202ENST00000501122 22743 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 AC100871.1-201ENST00000507871 1456 ntBASIC4.55□□□□□ -1.68
PTPN3P26045 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN3P26045 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN3P26045 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.55□□□□□ -1.68
PTPN3P26045 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.54□□□□□ -1.68
PTPN3P26045 SEC63P2-201ENST00000503863 1939 ntBASIC4.54□□□□□ -1.68
PTPN3P26045 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN3P26045 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.54□□□□□ -1.68
PTPN3P26045 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN3P26045 LINC01355-201ENST00000566551 5444 ntBASIC4.54□□□□□ -1.68
PTPN3P26045 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN3P26045 AC079741.1-201ENST00000321498 212 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms