Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC5.67□□□□□ -1.5
VAMP1P23763 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP1P23763 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.67□□□□□ -1.5
VAMP1P23763 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC5.67□□□□□ -1.5
VAMP1P23763 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
VAMP1P23763 AC004232.1-201ENST00000571388 208 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 AC006120.1-201ENST00000579375 546 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP1P23763 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC5.67□□□□□ -1.5
VAMP1P23763 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.67□□□□□ -1.5
VAMP1P23763 AL023806.2-201ENST00000603042 263 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 AC006363.1-201ENST00000603806 463 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 AL391646.1-201ENST00000603860 190 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP1P23763 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP1P23763 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
VAMP1P23763 FRG1KP-201ENST00000623592 341 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 AC110769.3-201ENST00000624567 1173 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP1P23763 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP1P23763 FKBP1AP4-201ENST00000631775 336 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP1P23763 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
VAMP1P23763 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VAMP1P23763 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.66□□□□□ -1.5
VAMP1P23763 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
VAMP1P23763 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.66□□□□□ -1.5
VAMP1P23763 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.66□□□□□ -1.5
VAMP1P23763 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VAMP1P23763 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
VAMP1P23763 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
VAMP1P23763 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VAMP1P23763 OR5J1P-201ENST00000313544 939 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VAMP1P23763 RNU6-223P-201ENST00000362830 107 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 RNU4-1-201ENST00000363925 141 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 RNU6-1090P-201ENST00000364065 94 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 RN7SKP118-201ENST00000364331 330 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 U3.11-201ENST00000364476 212 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 Y_RNA.295-201ENST00000364918 102 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VAMP1P23763 AL080315.1-201ENST00000406055 466 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 RNU4-65P-201ENST00000410473 140 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 VN1R33P-201ENST00000411800 887 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC5.66□□□□□ -1.5
VAMP1P23763 RPS7P15-201ENST00000415804 584 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.66□□□□□ -1.5
VAMP1P23763 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.66□□□□□ -1.5
VAMP1P23763 NQO1-204ENST00000439109 924 ntTSL 2 BASIC5.66□□□□□ -1.5
VAMP1P23763 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.66□□□□□ -1.5
VAMP1P23763 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.66□□□□□ -1.5
VAMP1P23763 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC5.66□□□□□ -1.5
VAMP1P23763 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.66□□□□□ -1.5
VAMP1P23763 RN7SL587P-201ENST00000459853 281 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 RN7SL552P-201ENST00000462094 276 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 AL079303.1-201ENST00000486611 463 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VAMP1P23763 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VAMP1P23763 FAM92A1P2-202ENST00000504766 877 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.66□□□□□ -1.5
VAMP1P23763 SCARNA20.3-201ENST00000516913 131 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.66□□□□□ -1.5
VAMP1P23763 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.66□□□□□ -1.5
VAMP1P23763 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VAMP1P23763 NF1P12-201ENST00000549593 583 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.66□□□□□ -1.5
VAMP1P23763 AL359212.1-201ENST00000556608 614 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 AL133153.1-201ENST00000557756 303 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.66□□□□□ -1.5
VAMP1P23763 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.66□□□□□ -1.5
VAMP1P23763 MIR4470-201ENST00000583453 72 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VAMP1P23763 NRBF2P5-201ENST00000603087 788 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 AC017083.3-201ENST00000609955 700 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 TCL6_3.1-201ENST00000619064 137 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 AC019226.1-201ENST00000625666 515 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VAMP1P23763 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
VAMP1P23763 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.66□□□□□ -1.5
VAMP1P23763 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VAMP1P23763 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VAMP1P23763 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VAMP1P23763 NXPH1-205ENST00000602349 1953 ntBASIC5.66□□□□□ -1.5
VAMP1P23763 PWRN1-212ENST00000569908 1435 ntBASIC5.65□□□□□ -1.5
VAMP1P23763 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
VAMP1P23763 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.65□□□□□ -1.5
VAMP1P23763 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
VAMP1P23763 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.65□□□□□ -1.5
VAMP1P23763 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VAMP1P23763 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.65□□□□□ -1.5
VAMP1P23763 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.65□□□□□ -1.5
VAMP1P23763 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VAMP1P23763 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
VAMP1P23763 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
VAMP1P23763 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms