Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.71□□□□□ -1.66
PCNAP12004 AC015688.2-201ENST00000584523 262 ntBASIC4.71□□□□□ -1.66
PCNAP12004 EIF1P6-201ENST00000600054 334 ntBASIC4.71□□□□□ -1.66
PCNAP12004 AC116447.1-201ENST00000613153 453 ntBASIC4.71□□□□□ -1.66
PCNAP12004 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.71□□□□□ -1.66
PCNAP12004 AC011330.2-201ENST00000621680 635 ntBASIC4.71□□□□□ -1.66
PCNAP12004 AP000676.4-201ENST00000624659 623 ntBASIC4.71□□□□□ -1.66
PCNAP12004 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.71□□□□□ -1.66
PCNAP12004 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.71□□□□□ -1.66
PCNAP12004 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.71□□□□□ -1.66
PCNAP12004 AL355480.1-201ENST00000629041 99 ntBASIC4.71□□□□□ -1.66
PCNAP12004 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
PCNAP12004 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCNAP12004 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PCNAP12004 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCNAP12004 DDX18P5-201ENST00000534547 1306 ntBASIC4.71□□□□□ -1.66
PCNAP12004 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCNAP12004 AC015813.6-201ENST00000624409 5808 ntBASIC4.7□□□□□ -1.66
PCNAP12004 AC008758.3-201ENST00000507003 1829 ntBASIC4.7□□□□□ -1.66
PCNAP12004 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCNAP12004 AC005261.4-201ENST00000600047 1385 ntBASIC4.7□□□□□ -1.66
PCNAP12004 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCNAP12004 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.7□□□□□ -1.66
PCNAP12004 AC114546.3-201ENST00000623582 1734 ntBASIC4.7□□□□□ -1.66
PCNAP12004 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCNAP12004 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCNAP12004 RNA5SP507-201ENST00000363603 121 ntBASIC4.7□□□□□ -1.66
PCNAP12004 RNU1-87P-201ENST00000363727 170 ntBASIC4.7□□□□□ -1.66
PCNAP12004 RNU4-51P-201ENST00000364206 140 ntBASIC4.7□□□□□ -1.66
PCNAP12004 SNORA70-201ENST00000384436 135 ntBASIC4.7□□□□□ -1.66
PCNAP12004 AF228730.1-201ENST00000397972 663 ntBASIC4.7□□□□□ -1.66
PCNAP12004 MIR1178-201ENST00000408396 91 ntBASIC4.7□□□□□ -1.66
PCNAP12004 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.7□□□□□ -1.66
PCNAP12004 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.7□□□□□ -1.66
PCNAP12004 TMBIM7P-201ENST00000418074 855 ntBASIC4.7□□□□□ -1.66
PCNAP12004 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.7□□□□□ -1.66
PCNAP12004 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.7□□□□□ -1.66
PCNAP12004 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.7□□□□□ -1.66
PCNAP12004 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.7□□□□□ -1.66
PCNAP12004 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCNAP12004 CR769776.1-201ENST00000441254 787 ntBASIC4.7□□□□□ -1.66
PCNAP12004 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.7□□□□□ -1.66
PCNAP12004 AL589880.1-201ENST00000448271 287 ntBASIC4.7□□□□□ -1.66
PCNAP12004 AC098826.2-201ENST00000452011 651 ntBASIC4.7□□□□□ -1.66
PCNAP12004 RN7SL517P-201ENST00000462240 305 ntBASIC4.7□□□□□ -1.66
PCNAP12004 NAP1L1P3-201ENST00000462291 880 ntBASIC4.7□□□□□ -1.66
PCNAP12004 RPL7AP28-201ENST00000464513 571 ntBASIC4.7□□□□□ -1.66
PCNAP12004 PRDX3P4-201ENST00000470828 747 ntBASIC4.7□□□□□ -1.66
PCNAP12004 AC004815.1-201ENST00000484185 331 ntBASIC4.7□□□□□ -1.66
PCNAP12004 RN7SL97P-201ENST00000486780 299 ntBASIC4.7□□□□□ -1.66
PCNAP12004 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCNAP12004 AC105233.1-201ENST00000498840 781 ntBASIC4.7□□□□□ -1.66
PCNAP12004 AC010627.1-201ENST00000503819 1294 ntBASIC4.7□□□□□ -1.66
PCNAP12004 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.7□□□□□ -1.66
PCNAP12004 HMGB3P13-201ENST00000511263 607 ntBASIC4.7□□□□□ -1.66
PCNAP12004 Y_RNA.719-201ENST00000517156 106 ntBASIC4.7□□□□□ -1.66
PCNAP12004 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.7□□□□□ -1.66
PCNAP12004 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.7□□□□□ -1.66
PCNAP12004 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.7□□□□□ -1.66
PCNAP12004 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.7□□□□□ -1.66
PCNAP12004 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.7□□□□□ -1.66
PCNAP12004 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.7□□□□□ -1.66
PCNAP12004 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCNAP12004 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.7□□□□□ -1.66
PCNAP12004 MTND3P13-201ENST00000574391 343 ntBASIC4.7□□□□□ -1.66
PCNAP12004 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.7□□□□□ -1.66
PCNAP12004 SNORA74C-1-201ENST00000580726 201 ntBASIC4.7□□□□□ -1.66
PCNAP12004 ELOCP28-201ENST00000590044 317 ntBASIC4.7□□□□□ -1.66
PCNAP12004 CCDC58P3-201ENST00000590792 430 ntBASIC4.7□□□□□ -1.66
PCNAP12004 GAS5-AS1-201ENST00000602767 694 ntBASIC4.7□□□□□ -1.66
PCNAP12004 AC113368.1-201ENST00000603736 382 ntBASIC4.7□□□□□ -1.66
PCNAP12004 AL035411.2-201ENST00000604022 421 ntBASIC4.7□□□□□ -1.66
PCNAP12004 Z99289.3-201ENST00000605586 594 ntBASIC4.7□□□□□ -1.66
PCNAP12004 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.7□□□□□ -1.66
PCNAP12004 AP000238.1-201ENST00000608759 426 ntBASIC4.7□□□□□ -1.66
PCNAP12004 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCNAP12004 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCNAP12004 AC139769.3-201ENST00000618383 175 ntBASIC4.7□□□□□ -1.66
PCNAP12004 AC013470.4-201ENST00000619978 986 ntBASIC4.7□□□□□ -1.66
PCNAP12004 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.7□□□□□ -1.66
PCNAP12004 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCNAP12004 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCNAP12004 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.7□□□□□ -1.66
PCNAP12004 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
PCNAP12004 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.69□□□□□ -1.66
PCNAP12004 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.69□□□□□ -1.66
PCNAP12004 AC099654.2-201ENST00000433031 1980 ntBASIC4.69□□□□□ -1.66
PCNAP12004 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCNAP12004 MTCO1P6-201ENST00000481192 1384 ntBASIC4.69□□□□□ -1.66
PCNAP12004 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.69□□□□□ -1.66
PCNAP12004 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.69□□□□□ -1.66
PCNAP12004 RNU1-94P-201ENST00000362627 173 ntBASIC4.69□□□□□ -1.66
PCNAP12004 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCNAP12004 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PCNAP12004 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PCNAP12004 AL590290.1-201ENST00000405336 380 ntBASIC4.69□□□□□ -1.66
PCNAP12004 RNU4-34P-201ENST00000410431 124 ntBASIC4.69□□□□□ -1.66
PCNAP12004 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCNAP12004 KRR1P1-201ENST00000419430 803 ntBASIC4.69□□□□□ -1.66
PCNAP12004 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms