Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.51□□□□□ -1.85
FREM3P0C091 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
FREM3P0C091 AC244505.7-201ENST00000599675 272 ntBASIC3.51□□□□□ -1.85
FREM3P0C091 AL161637.1-201ENST00000622380 412 ntBASIC3.51□□□□□ -1.85
FREM3P0C091 AC099654.11-201ENST00000638857 294 ntBASIC3.51□□□□□ -1.85
FREM3P0C091 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.51□□□□□ -1.85
FREM3P0C091 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FREM3P0C091 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
FREM3P0C091 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
FREM3P0C091 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.51□□□□□ -1.85
FREM3P0C091 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.5□□□□□ -1.85
FREM3P0C091 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
FREM3P0C091 RNA5SP104-201ENST00000410989 118 ntBASIC3.5□□□□□ -1.85
FREM3P0C091 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
FREM3P0C091 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.5□□□□□ -1.85
FREM3P0C091 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.5□□□□□ -1.85
FREM3P0C091 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.5□□□□□ -1.85
FREM3P0C091 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.5□□□□□ -1.85
FREM3P0C091 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.5□□□□□ -1.85
FREM3P0C091 AC053481.3-201ENST00000577881 843 ntBASIC3.5□□□□□ -1.85
FREM3P0C091 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.5□□□□□ -1.85
FREM3P0C091 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
FREM3P0C091 AC006971.1-201ENST00000407916 4486 ntBASIC3.5□□□□□ -1.85
FREM3P0C091 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.5□□□□□ -1.85
FREM3P0C091 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC3.5□□□□□ -1.85
FREM3P0C091 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.5□□□□□ -1.85
FREM3P0C091 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
FREM3P0C091 AC093578.1-201ENST00000415219 368 ntBASIC3.5□□□□□ -1.85
FREM3P0C091 AL391219.1-201ENST00000422570 483 ntBASIC3.5□□□□□ -1.85
FREM3P0C091 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.5□□□□□ -1.85
FREM3P0C091 VN1R105P-201ENST00000486595 910 ntBASIC3.5□□□□□ -1.85
FREM3P0C091 AC109458.1-201ENST00000508858 316 ntBASIC3.5□□□□□ -1.85
FREM3P0C091 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.5□□□□□ -1.85
FREM3P0C091 MTND1P6-201ENST00000523621 946 ntBASIC3.5□□□□□ -1.85
FREM3P0C091 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
FREM3P0C091 MIR5685-201ENST00000579080 79 ntBASIC3.5□□□□□ -1.85
FREM3P0C091 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.5□□□□□ -1.85
FREM3P0C091 CCDC58P3-201ENST00000590792 430 ntBASIC3.5□□□□□ -1.85
FREM3P0C091 AC068790.5-201ENST00000602741 355 ntBASIC3.5□□□□□ -1.85
FREM3P0C091 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
FREM3P0C091 AC006504.1-201ENST00000562493 3666 ntBASIC3.5□□□□□ -1.85
FREM3P0C091 IPO8P1-201ENST00000455509 3109 ntBASIC3.5□□□□□ -1.85
FREM3P0C091 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
FREM3P0C091 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
FREM3P0C091 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
FREM3P0C091 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
FREM3P0C091 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
FREM3P0C091 AL445584.1-201ENST00000431451 330 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 ELOCP18-201ENST00000434209 337 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.49□□□□□ -1.85
FREM3P0C091 AC092691.2-201ENST00000461787 803 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 GAPDHP36-201ENST00000480688 918 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 FCF1P3-201ENST00000496394 590 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.49□□□□□ -1.85
FREM3P0C091 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.49□□□□□ -1.85
FREM3P0C091 AC008802.1-201ENST00000519121 791 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.49□□□□□ -1.85
FREM3P0C091 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.49□□□□□ -1.85
FREM3P0C091 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.49□□□□□ -1.85
FREM3P0C091 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.49□□□□□ -1.85
FREM3P0C091 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.49□□□□□ -1.85
FREM3P0C091 MIR3158-1-201ENST00000583596 81 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 AL606490.9-201ENST00000603331 271 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
FREM3P0C091 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
FREM3P0C091 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
FREM3P0C091 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
FREM3P0C091 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
FREM3P0C091 AC018555.1-201ENST00000567548 1980 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 RNA5SP387-201ENST00000364226 106 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 RNA5SP51-201ENST00000364750 119 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 MIR554-201ENST00000384874 96 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.49□□□□□ -1.85
FREM3P0C091 AC004552.1-201ENST00000419089 348 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.49□□□□□ -1.85
FREM3P0C091 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.49□□□□□ -1.85
FREM3P0C091 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.49□□□□□ -1.85
FREM3P0C091 NOTCH2P1-201ENST00000443481 624 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.49□□□□□ -1.85
FREM3P0C091 RPS26P3-201ENST00000470205 348 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 RPL23AP71-201ENST00000470966 469 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 AC090543.2-201ENST00000483963 348 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 AC004057.1-201ENST00000485827 348 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.49□□□□□ -1.85
FREM3P0C091 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.49□□□□□ -1.85
FREM3P0C091 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.49□□□□□ -1.85
FREM3P0C091 TRAV15-201ENST00000556680 249 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 AL133457.1-201ENST00000564251 987 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 AC025627.2-201ENST00000576220 160 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.49□□□□□ -1.85
FREM3P0C091 AL773545.4-201ENST00000637262 310 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 AL513478.4-201ENST00000641636 310 ntBASIC3.49□□□□□ -1.85
FREM3P0C091 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
FREM3P0C091 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.49□□□□□ -1.85
FREM3P0C091 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
FREM3P0C091 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.48□□□□□ -1.85
FREM3P0C091 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.48□□□□□ -1.85
FREM3P0C091 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC3.48□□□□□ -1.85
FREM3P0C091 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms