Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXC4P09017 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXC4P09017 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXC4P09017 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.05□□□□□ -1.76
HOXC4P09017 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXC4P09017 MIR5684-201ENST00000585074 65 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXC4P09017 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
HOXC4P09017 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC4P09017 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.05□□□□□ -1.76
HOXC4P09017 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXC4P09017 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HOXC4P09017 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXC4P09017 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC4P09017 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.05□□□□□ -1.76
HOXC4P09017 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXC4P09017 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC4P09017 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC4P09017 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC4P09017 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC4P09017 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC4P09017 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HOXC4P09017 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXC4P09017 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXC4P09017 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXC4P09017 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXC4P09017 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
HOXC4P09017 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC4P09017 RNU1-64P-201ENST00000365443 163 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HOXC4P09017 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC4P09017 NCSTNP1-201ENST00000406229 144 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 AL603766.1-201ENST00000407763 664 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 HSPE1P12-201ENST00000412576 301 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 CASKP1-201ENST00000412870 582 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 AC019070.1-201ENST00000415008 1024 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 AC244453.4-201ENST00000419150 388 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 OR8F1P-201ENST00000425243 930 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXC4P09017 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC4P09017 CASP3P1-201ENST00000446037 609 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 AC099063.2-201ENST00000446360 662 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 CCRL1P1-201ENST00000449542 1053 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXC4P09017 FCF1P7-201ENST00000451185 558 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXC4P09017 FTH1P21-201ENST00000512179 511 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.04□□□□□ -1.76
HOXC4P09017 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXC4P09017 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXC4P09017 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXC4P09017 AC124068.1-201ENST00000563131 678 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 AGGF1P6-201ENST00000569213 976 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 AC053481.4-201ENST00000583164 216 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.04□□□□□ -1.76
HOXC4P09017 AC008638.3-201ENST00000603341 463 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 AC034236.3-201ENST00000605999 461 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXC4P09017 RMST_5.1-201ENST00000618704 126 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXC4P09017 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXC4P09017 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HOXC4P09017 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC4P09017 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXC4P09017 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC4P09017 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC4P09017 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC4P09017 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.04□□□□□ -1.76
HOXC4P09017 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC4P09017 AC007390.2-201ENST00000606229 3803 ntBASIC4.04□□□□□ -1.76
HOXC4P09017 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC4P09017 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXC4P09017 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HOXC4P09017 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXC4P09017 AL161912.2-201ENST00000565707 3007 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC4P09017 AC011266.1-201ENST00000624119 3569 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC4P09017 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC4P09017 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC4P09017 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC4P09017 NPM1P10-201ENST00000398310 865 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC4P09017 MTCYBP7-201ENST00000419540 1134 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 RPL17P36-201ENST00000420302 549 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 AL358472.1-201ENST00000431295 329 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 MTCYBP21-201ENST00000443300 1113 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 RPL29P14-201ENST00000495837 428 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 IGLVIV-53-201ENST00000520107 367 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXC4P09017 AC069240.1-201ENST00000548774 375 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 AC091516.1-201ENST00000549191 703 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXC4P09017 AC087888.1-201ENST00000550884 1254 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.03□□□□□ -1.76
HOXC4P09017 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC4P09017 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC4P09017 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms