Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTDNEP1O95476 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.41□□□□□ -1.7
CTDNEP1O95476 OR5AW1P-201ENST00000426334 1006 ntBASIC4.41□□□□□ -1.7
CTDNEP1O95476 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.41□□□□□ -1.7
CTDNEP1O95476 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.41□□□□□ -1.7
CTDNEP1O95476 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.41□□□□□ -1.7
CTDNEP1O95476 AC092809.1-201ENST00000441469 474 ntBASIC4.41□□□□□ -1.7
CTDNEP1O95476 AL133477.1-201ENST00000457472 514 ntBASIC4.41□□□□□ -1.7
CTDNEP1O95476 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.41□□□□□ -1.7
CTDNEP1O95476 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.41□□□□□ -1.7
CTDNEP1O95476 AC111000.5-201ENST00000506559 1178 ntBASIC4.41□□□□□ -1.7
CTDNEP1O95476 AC022695.1-201ENST00000522089 237 ntBASIC4.41□□□□□ -1.7
CTDNEP1O95476 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.41□□□□□ -1.7
CTDNEP1O95476 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.41□□□□□ -1.7
CTDNEP1O95476 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CTDNEP1O95476 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.41□□□□□ -1.7
CTDNEP1O95476 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.41□□□□□ -1.7
CTDNEP1O95476 AL133247.2-201ENST00000603236 482 ntBASIC4.41□□□□□ -1.7
CTDNEP1O95476 AC133552.5-201ENST00000604266 540 ntBASIC4.41□□□□□ -1.7
CTDNEP1O95476 AC067959.1-201ENST00000604334 379 ntBASIC4.41□□□□□ -1.7
CTDNEP1O95476 MIR6875-201ENST00000617506 72 ntBASIC4.41□□□□□ -1.7
CTDNEP1O95476 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTDNEP1O95476 MAPK10-372ENST00000641954 3413 ntBASIC4.41□□□□□ -1.7
CTDNEP1O95476 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTDNEP1O95476 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CTDNEP1O95476 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
CTDNEP1O95476 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CTDNEP1O95476 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CTDNEP1O95476 AL450326.2-201ENST00000421913 1962 ntBASIC4.4□□□□□ -1.7
CTDNEP1O95476 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CTDNEP1O95476 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.4□□□□□ -1.7
CTDNEP1O95476 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CTDNEP1O95476 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CTDNEP1O95476 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CTDNEP1O95476 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CTDNEP1O95476 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTDNEP1O95476 RNA5SP443-201ENST00000363083 132 ntBASIC4.4□□□□□ -1.71
CTDNEP1O95476 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CTDNEP1O95476 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTDNEP1O95476 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CTDNEP1O95476 AC106901.1-201ENST00000425086 698 ntBASIC4.4□□□□□ -1.71
CTDNEP1O95476 OR4F13P-201ENST00000428478 931 ntBASIC4.4□□□□□ -1.71
CTDNEP1O95476 NDUFB1P1-201ENST00000435191 180 ntBASIC4.4□□□□□ -1.71
CTDNEP1O95476 AC098824.1-201ENST00000453565 980 ntBASIC4.4□□□□□ -1.71
CTDNEP1O95476 CYCSP53-201ENST00000455540 265 ntBASIC4.4□□□□□ -1.71
CTDNEP1O95476 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.4□□□□□ -1.71
CTDNEP1O95476 RN7SL385P-201ENST00000468873 276 ntBASIC4.4□□□□□ -1.71
CTDNEP1O95476 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.4□□□□□ -1.71
CTDNEP1O95476 RNU6-943P-201ENST00000516960 98 ntBASIC4.4□□□□□ -1.71
CTDNEP1O95476 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.4□□□□□ -1.71
CTDNEP1O95476 PARP1P2-201ENST00000556806 195 ntBASIC4.4□□□□□ -1.71
CTDNEP1O95476 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.4□□□□□ -1.71
CTDNEP1O95476 AC007224.1-201ENST00000564410 144 ntBASIC4.4□□□□□ -1.71
CTDNEP1O95476 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.4□□□□□ -1.71
CTDNEP1O95476 AL606490.9-201ENST00000603331 271 ntBASIC4.4□□□□□ -1.71
CTDNEP1O95476 AC005229.3-201ENST00000603438 323 ntBASIC4.4□□□□□ -1.71
CTDNEP1O95476 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.4□□□□□ -1.71
CTDNEP1O95476 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CTDNEP1O95476 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CTDNEP1O95476 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTDNEP1O95476 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTDNEP1O95476 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTDNEP1O95476 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.4□□□□□ -1.71
CTDNEP1O95476 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTDNEP1O95476 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
CTDNEP1O95476 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTDNEP1O95476 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTDNEP1O95476 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTDNEP1O95476 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTDNEP1O95476 RNA5SP515-201ENST00000364570 118 ntBASIC4.39□□□□□ -1.71
CTDNEP1O95476 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTDNEP1O95476 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
CTDNEP1O95476 HSPE1P8-201ENST00000406997 288 ntBASIC4.39□□□□□ -1.71
CTDNEP1O95476 HMGB3P9-201ENST00000441799 583 ntBASIC4.39□□□□□ -1.71
CTDNEP1O95476 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.39□□□□□ -1.71
CTDNEP1O95476 RN7SL323P-201ENST00000494712 295 ntBASIC4.39□□□□□ -1.71
CTDNEP1O95476 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.39□□□□□ -1.71
CTDNEP1O95476 AC007991.1-201ENST00000522680 631 ntBASIC4.39□□□□□ -1.71
CTDNEP1O95476 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.39□□□□□ -1.71
CTDNEP1O95476 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.39□□□□□ -1.71
CTDNEP1O95476 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.39□□□□□ -1.71
CTDNEP1O95476 AL133457.1-201ENST00000564251 987 ntBASIC4.39□□□□□ -1.71
CTDNEP1O95476 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.39□□□□□ -1.71
CTDNEP1O95476 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.39□□□□□ -1.71
CTDNEP1O95476 AC010857.1-201ENST00000606398 594 ntBASIC4.39□□□□□ -1.71
CTDNEP1O95476 RNU1-30P-201ENST00000606575 163 ntBASIC4.39□□□□□ -1.71
CTDNEP1O95476 AC131238.1-201ENST00000617135 328 ntBASIC4.39□□□□□ -1.71
CTDNEP1O95476 AC020763.5-201ENST00000623298 430 ntBASIC4.39□□□□□ -1.71
CTDNEP1O95476 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.39□□□□□ -1.71
CTDNEP1O95476 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTDNEP1O95476 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
CTDNEP1O95476 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CTDNEP1O95476 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.39□□□□□ -1.71
CTDNEP1O95476 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTDNEP1O95476 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.39□□□□□ -1.71
CTDNEP1O95476 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTDNEP1O95476 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.39□□□□□ -1.71
CTDNEP1O95476 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CTDNEP1O95476 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CTDNEP1O95476 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms