Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.15□□□□□ -1.75
CEACAM4O75871 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.15□□□□□ -1.75
CEACAM4O75871 RNU6-1192P-201ENST00000612197 107 ntBASIC4.15□□□□□ -1.75
CEACAM4O75871 RNU6-489P-201ENST00000618289 107 ntBASIC4.15□□□□□ -1.75
CEACAM4O75871 AC084824.4-201ENST00000620106 731 ntBASIC4.15□□□□□ -1.75
CEACAM4O75871 AP003485.1-201ENST00000625093 753 ntBASIC4.15□□□□□ -1.75
CEACAM4O75871 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CEACAM4O75871 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.15□□□□□ -1.75
CEACAM4O75871 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CEACAM4O75871 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CEACAM4O75871 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.15□□□□□ -1.75
CEACAM4O75871 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.15□□□□□ -1.75
CEACAM4O75871 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CEACAM4O75871 NEAT1-202ENST00000501122 22743 ntBASIC4.15□□□□□ -1.75
CEACAM4O75871 AL645568.2-201ENST00000432815 1337 ntBASIC4.15□□□□□ -1.75
CEACAM4O75871 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CEACAM4O75871 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CEACAM4O75871 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CEACAM4O75871 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.15□□□□□ -1.75
CEACAM4O75871 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CEACAM4O75871 AL445487.1-201ENST00000415694 1580 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 LINC00622-201ENST00000562811 1570 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CEACAM4O75871 BX005019.1-201ENST00000561881 1810 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CEACAM4O75871 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.14□□□□□ -1.75
CEACAM4O75871 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CEACAM4O75871 RNU1-64P-201ENST00000365443 163 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 RNU6-207P-201ENST00000384137 107 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 RNU6-185P-201ENST00000384421 107 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 RNU6-1257P-201ENST00000384625 110 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 AC093719.1-202ENST00000392735 373 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 HMGB3P18-201ENST00000406327 590 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.14□□□□□ -1.75
CEACAM4O75871 RNA5SP498-201ENST00000411342 120 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 EIF4HP2-201ENST00000424380 563 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.14□□□□□ -1.75
CEACAM4O75871 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CEACAM4O75871 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.14□□□□□ -1.75
CEACAM4O75871 DHFRP3-201ENST00000455595 559 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.14□□□□□ -1.75
CEACAM4O75871 RNU7-27P-201ENST00000459281 62 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 AC041039.1-201ENST00000485656 536 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.14□□□□□ -1.75
CEACAM4O75871 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.14□□□□□ -1.75
CEACAM4O75871 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.14□□□□□ -1.75
CEACAM4O75871 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CEACAM4O75871 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.14□□□□□ -1.75
CEACAM4O75871 AC008083.2-201ENST00000546707 476 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 LSM3P2-201ENST00000551246 273 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.14□□□□□ -1.75
CEACAM4O75871 NPM1P47-201ENST00000560843 856 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.14□□□□□ -1.75
CEACAM4O75871 AC106785.1-201ENST00000565935 262 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 AC022884.3-201ENST00000579571 248 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 AC090312.1-201ENST00000580637 348 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 MIR548Y-201ENST00000582739 110 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 RN7SL622P-201ENST00000585292 275 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 AC079610.2-201ENST00000604818 690 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 AC113403.1-201ENST00000604910 193 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 AC011472.4-201ENST00000615848 491 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 uc_338.13-201ENST00000618243 179 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 AC093875.1-201ENST00000623688 504 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.14□□□□□ -1.75
CEACAM4O75871 AC083865.1-201ENST00000636634 831 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.14□□□□□ -1.75
CEACAM4O75871 AC006927.2-201ENST00000639256 389 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CEACAM4O75871 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.14□□□□□ -1.75
CEACAM4O75871 SMG1P4-204ENST00000523028 4131 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.14□□□□□ -1.75
CEACAM4O75871 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.14□□□□□ -1.75
CEACAM4O75871 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CEACAM4O75871 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CEACAM4O75871 CASC19-204ENST00000641001 2055 ntBASIC4.14□□□□□ -1.75
CEACAM4O75871 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CEACAM4O75871 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CEACAM4O75871 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CEACAM4O75871 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CEACAM4O75871 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CEACAM4O75871 MTCO1P18-201ENST00000455518 1419 ntBASIC4.13□□□□□ -1.75
CEACAM4O75871 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.13□□□□□ -1.75
CEACAM4O75871 PHKBP1-201ENST00000450951 1951 ntBASIC4.13□□□□□ -1.75
CEACAM4O75871 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.13□□□□□ -1.75
CEACAM4O75871 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CEACAM4O75871 RNU5B-4P-201ENST00000363508 111 ntBASIC4.13□□□□□ -1.75
CEACAM4O75871 RNU1-132P-201ENST00000364300 164 ntBASIC4.13□□□□□ -1.75
CEACAM4O75871 RNA5SP317-201ENST00000410176 116 ntBASIC4.13□□□□□ -1.75
CEACAM4O75871 RNA5SP311-201ENST00000411290 116 ntBASIC4.13□□□□□ -1.75
CEACAM4O75871 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.13□□□□□ -1.75
CEACAM4O75871 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.13□□□□□ -1.75
CEACAM4O75871 AC104333.2-201ENST00000422630 192 ntBASIC4.13□□□□□ -1.75
CEACAM4O75871 AC241520.1-201ENST00000422654 1099 ntBASIC4.13□□□□□ -1.75
CEACAM4O75871 AC093422.3-201ENST00000428506 305 ntBASIC4.13□□□□□ -1.75
CEACAM4O75871 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.13□□□□□ -1.75
CEACAM4O75871 MTND2P2-201ENST00000434633 945 ntBASIC4.13□□□□□ -1.75
CEACAM4O75871 OR4C10P-201ENST00000434991 931 ntBASIC4.13□□□□□ -1.75
CEACAM4O75871 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.13□□□□□ -1.75
CEACAM4O75871 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CEACAM4O75871 AL357520.1-201ENST00000441557 453 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms