Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC022655.2-201ENST00000577280 318 ntBASIC1.69□□□□□ -2.14
USH2AO75445 SNX6P1-201ENST00000601728 1224 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AC084036.1-201ENST00000609190 508 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC1.69□□□□□ -2.14
USH2AO75445 AL355365.1-201ENST00000616480 294 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC1.69□□□□□ -2.14
USH2AO75445 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
USH2AO75445 AC010329.1-201ENST00000593903 8328 ntBASIC1.69□□□□□ -2.14
USH2AO75445 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 RNU6-7-201ENST00000364784 107 ntBASIC1.69□□□□□ -2.14
USH2AO75445 RNU6-8-201ENST00000365467 107 ntBASIC1.69□□□□□ -2.14
USH2AO75445 MIR504-201ENST00000385065 83 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC1.69□□□□□ -2.14
USH2AO75445 RPS17P13-201ENST00000448974 407 ntBASIC1.69□□□□□ -2.14
USH2AO75445 RNA5SP446-201ENST00000515955 82 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC1.69□□□□□ -2.14
USH2AO75445 AC009303.3-201ENST00000591103 736 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AC107993.1-201ENST00000591343 684 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AC005520.3-201ENST00000602874 370 ntBASIC1.69□□□□□ -2.14
USH2AO75445 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
USH2AO75445 DCAF13P3-201ENST00000561147 1334 ntBASIC1.69□□□□□ -2.14
USH2AO75445 ZNF962P-201ENST00000443465 3140 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AL022311.1-201ENST00000623726 19416 ntBASIC1.69□□□□□ -2.14
USH2AO75445 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
USH2AO75445 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 DNM1P47-203ENST00000571780 12667 ntBASIC1.69□□□□□ -2.14
USH2AO75445 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 RNA5SP399-201ENST00000364003 117 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AL445529.1-201ENST00000398713 389 ntBASIC1.69□□□□□ -2.14
USH2AO75445 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC1.69□□□□□ -2.14
USH2AO75445 AL133477.1-201ENST00000457472 514 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC1.69□□□□□ -2.14
USH2AO75445 AC021660.1-201ENST00000465006 554 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AC006511.1-201ENST00000470614 315 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC1.69□□□□□ -2.14
USH2AO75445 MIR5186-201ENST00000577504 120 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AC130352.1-201ENST00000602979 661 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AC006557.5-201ENST00000603126 811 ntBASIC1.69□□□□□ -2.14
USH2AO75445 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.69□□□□□ -2.14
USH2AO75445 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 AC138393.1-206ENST00000540997 1886 ntBASIC1.69□□□□□ -2.14
USH2AO75445 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC1.69□□□□□ -2.14
USH2AO75445 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC1.69□□□□□ -2.14
USH2AO75445 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 MIR1287-201ENST00000408492 90 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC1.69□□□□□ -2.14
USH2AO75445 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC1.69□□□□□ -2.14
USH2AO75445 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.69□□□□□ -2.14
USH2AO75445 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC1.69□□□□□ -2.14
USH2AO75445 SNORA70.17-201ENST00000516449 133 ntBASIC1.69□□□□□ -2.14
USH2AO75445 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.69□□□□□ -2.14
USH2AO75445 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC1.69□□□□□ -2.14
USH2AO75445 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC1.69□□□□□ -2.14
USH2AO75445 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC1.69□□□□□ -2.14
USH2AO75445 UG0898H09-202ENST00000623646 7040 ntBASIC1.69□□□□□ -2.14
USH2AO75445 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC1.69□□□□□ -2.14
USH2AO75445 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
USH2AO75445 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC1.68□□□□□ -2.14
USH2AO75445 AC018529.3-201ENST00000624212 2254 ntBASIC1.68□□□□□ -2.14
USH2AO75445 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
USH2AO75445 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
USH2AO75445 AC004656.1-201ENST00000568479 4951 ntBASIC1.68□□□□□ -2.14
USH2AO75445 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
USH2AO75445 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
USH2AO75445 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
USH2AO75445 SNORD35B-201ENST00000363660 87 ntBASIC1.68□□□□□ -2.14
USH2AO75445 SEPT7P2-202ENST00000398921 823 ntBASIC1.68□□□□□ -2.14
USH2AO75445 RPS4XP8-201ENST00000402039 771 ntBASIC1.68□□□□□ -2.14
USH2AO75445 AC062016.2-201ENST00000420950 676 ntBASIC1.68□□□□□ -2.14
USH2AO75445 AL031736.2-201ENST00000426573 787 ntBASIC1.68□□□□□ -2.14
USH2AO75445 AL591419.1-201ENST00000427423 339 ntBASIC1.68□□□□□ -2.14
USH2AO75445 AL645931.1-201ENST00000439737 410 ntBASIC1.68□□□□□ -2.14
USH2AO75445 NANOGNBP1-201ENST00000448444 480 ntBASIC1.68□□□□□ -2.14
USH2AO75445 RPS20P22-201ENST00000473700 357 ntBASIC1.68□□□□□ -2.14
USH2AO75445 RAC1P2-201ENST00000511164 579 ntBASIC1.68□□□□□ -2.14
USH2AO75445 RN7SKP67-201ENST00000515905 235 ntBASIC1.68□□□□□ -2.14
USH2AO75445 RNU2-27P-201ENST00000516185 142 ntBASIC1.68□□□□□ -2.14
USH2AO75445 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC1.68□□□□□ -2.14
USH2AO75445 FRG1EP-201ENST00000634469 770 ntBASIC1.68□□□□□ -2.14
USH2AO75445 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC1.68□□□□□ -2.14
USH2AO75445 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms