Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RNF40O75150 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RNF40O75150 AL512646.1-201ENST00000269395 1077 ntBASIC7.47□□□□□ -1.21
RNF40O75150 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RNF40O75150 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RNF40O75150 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RNF40O75150 Y_RNA.212-201ENST00000364177 102 ntBASIC7.47□□□□□ -1.21
RNF40O75150 MIR551B-201ENST00000384984 96 ntBASIC7.47□□□□□ -1.21
RNF40O75150 RNU1-56P-201ENST00000391303 164 ntBASIC7.47□□□□□ -1.21
RNF40O75150 TPMTP2-201ENST00000414372 726 ntBASIC7.47□□□□□ -1.21
RNF40O75150 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.47□□□□□ -1.21
RNF40O75150 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.47□□□□□ -1.21
RNF40O75150 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RNF40O75150 AL356121.1-201ENST00000442911 156 ntBASIC7.47□□□□□ -1.21
RNF40O75150 MTCO3P45-201ENST00000443036 613 ntBASIC7.47□□□□□ -1.21
RNF40O75150 MTND1P17-201ENST00000448961 204 ntBASIC7.47□□□□□ -1.21
RNF40O75150 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RNF40O75150 AC079168.1-201ENST00000458741 345 ntBASIC7.47□□□□□ -1.21
RNF40O75150 RN7SL790P-201ENST00000474043 298 ntBASIC7.47□□□□□ -1.21
RNF40O75150 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC7.47□□□□□ -1.21
RNF40O75150 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC7.47□□□□□ -1.21
RNF40O75150 TRBVA-201ENST00000498804 316 ntBASIC7.47□□□□□ -1.21
RNF40O75150 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.47□□□□□ -1.21
RNF40O75150 MTND6P8-201ENST00000503471 522 ntBASIC7.47□□□□□ -1.21
RNF40O75150 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.47□□□□□ -1.21
RNF40O75150 SCARNA6.1-201ENST00000516989 238 ntBASIC7.47□□□□□ -1.21
RNF40O75150 RNA5SP337-201ENST00000517007 109 ntBASIC7.47□□□□□ -1.21
RNF40O75150 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.47□□□□□ -1.21
RNF40O75150 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.47□□□□□ -1.21
RNF40O75150 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.47□□□□□ -1.21
RNF40O75150 AL713866.2-201ENST00000603579 219 ntBASIC7.47□□□□□ -1.21
RNF40O75150 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.47□□□□□ -1.21
RNF40O75150 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.47□□□□□ -1.21
RNF40O75150 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.47□□□□□ -1.21
RNF40O75150 MIR6889-201ENST00000613185 59 ntBASIC7.47□□□□□ -1.21
RNF40O75150 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RNF40O75150 ATM-230ENST00000640388 578 ntTSL 5 BASIC7.47□□□□□ -1.21
RNF40O75150 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
RNF40O75150 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RNF40O75150 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RNF40O75150 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RNF40O75150 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.47□□□□□ -1.21
RNF40O75150 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
RNF40O75150 THUMPD3P1-201ENST00000506556 1480 ntBASIC7.47□□□□□ -1.21
RNF40O75150 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
RNF40O75150 AC022034.1-201ENST00000512867 2156 ntBASIC7.47□□□□□ -1.21
RNF40O75150 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RNF40O75150 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RNF40O75150 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.47□□□□□ -1.21
RNF40O75150 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
RNF40O75150 AL591848.4-201ENST00000567832 3472 ntBASIC7.47□□□□□ -1.21
RNF40O75150 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RNF40O75150 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
RNF40O75150 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.46□□□□□ -1.21
RNF40O75150 AC092125.1-201ENST00000562568 1995 ntBASIC7.46□□□□□ -1.21
RNF40O75150 AC079949.2-201ENST00000617117 2933 ntBASIC7.46□□□□□ -1.21
RNF40O75150 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RNF40O75150 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.46□□□□□ -1.21
RNF40O75150 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
RNF40O75150 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RNF40O75150 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.46□□□□□ -1.21
RNF40O75150 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC7.46□□□□□ -1.21
RNF40O75150 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RNF40O75150 RNU6-552P-201ENST00000362869 119 ntBASIC7.46□□□□□ -1.22
RNF40O75150 RNA5SP114-201ENST00000363780 113 ntBASIC7.46□□□□□ -1.22
RNF40O75150 RNU6-343P-201ENST00000364709 104 ntBASIC7.46□□□□□ -1.22
RNF40O75150 SNORA70.8-201ENST00000384231 136 ntBASIC7.46□□□□□ -1.22
RNF40O75150 RNU6-1151P-201ENST00000384684 107 ntBASIC7.46□□□□□ -1.22
RNF40O75150 MIR187-201ENST00000385062 109 ntBASIC7.46□□□□□ -1.22
RNF40O75150 SNORA11.5-201ENST00000408163 128 ntBASIC7.46□□□□□ -1.22
RNF40O75150 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF40O75150 BX323014.1-201ENST00000412876 237 ntBASIC7.46□□□□□ -1.22
RNF40O75150 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RNF40O75150 AC006509.1-201ENST00000420788 634 ntBASIC7.46□□□□□ -1.22
RNF40O75150 FAM183DP-201ENST00000421987 399 ntBASIC7.46□□□□□ -1.22
RNF40O75150 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF40O75150 RAC1P6-201ENST00000423911 575 ntBASIC7.46□□□□□ -1.22
RNF40O75150 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF40O75150 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.46□□□□□ -1.22
RNF40O75150 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF40O75150 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.46□□□□□ -1.22
RNF40O75150 AP1S2P1-201ENST00000457344 379 ntBASIC7.46□□□□□ -1.22
RNF40O75150 AC005165.2-201ENST00000466070 380 ntBASIC7.46□□□□□ -1.22
RNF40O75150 MYL6P4-201ENST00000477911 453 ntBASIC7.46□□□□□ -1.22
RNF40O75150 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF40O75150 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RNF40O75150 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.46□□□□□ -1.22
RNF40O75150 TMEM251P1-201ENST00000503717 318 ntBASIC7.46□□□□□ -1.22
RNF40O75150 AC008638.1-201ENST00000506035 866 ntBASIC7.46□□□□□ -1.22
RNF40O75150 AC116655.1-201ENST00000508324 901 ntBASIC7.46□□□□□ -1.22
RNF40O75150 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF40O75150 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.46□□□□□ -1.22
RNF40O75150 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.46□□□□□ -1.22
RNF40O75150 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF40O75150 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
RNF40O75150 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.46□□□□□ -1.22
RNF40O75150 AC092032.1-201ENST00000603090 165 ntBASIC7.46□□□□□ -1.22
RNF40O75150 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.46□□□□□ -1.22
RNF40O75150 AC091903.1-201ENST00000624322 454 ntBASIC7.46□□□□□ -1.22
RNF40O75150 CR381572.1-201ENST00000625098 102 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms