Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.42□□□□□ -1.7
TO15178 RPL36AP10-201ENST00000421785 322 ntBASIC4.42□□□□□ -1.7
TO15178 RPL30P3-201ENST00000424262 333 ntBASIC4.42□□□□□ -1.7
TO15178 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.42□□□□□ -1.7
TO15178 MTCO2P23-201ENST00000425216 680 ntBASIC4.42□□□□□ -1.7
TO15178 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.42□□□□□ -1.7
TO15178 DYNLL1P7-201ENST00000429273 258 ntBASIC4.42□□□□□ -1.7
TO15178 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.42□□□□□ -1.7
TO15178 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.42□□□□□ -1.7
TO15178 PTGES3P1-201ENST00000439531 483 ntBASIC4.42□□□□□ -1.7
TO15178 YWHAQP9-201ENST00000445891 512 ntBASIC4.42□□□□□ -1.7
TO15178 AL929288.2-201ENST00000446368 407 ntBASIC4.42□□□□□ -1.7
TO15178 OR1H1P-201ENST00000448731 937 ntBASIC4.42□□□□□ -1.7
TO15178 AC091685.2-201ENST00000454924 864 ntBASIC4.42□□□□□ -1.7
TO15178 RNU7-140P-201ENST00000459546 60 ntBASIC4.42□□□□□ -1.7
TO15178 RPL7AP28-201ENST00000464513 571 ntBASIC4.42□□□□□ -1.7
TO15178 AC063943.1-201ENST00000465434 453 ntBASIC4.42□□□□□ -1.7
TO15178 AC090686.1-201ENST00000481577 749 ntBASIC4.42□□□□□ -1.7
TO15178 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.42□□□□□ -1.7
TO15178 HMGB3P16-201ENST00000508037 287 ntBASIC4.42□□□□□ -1.7
TO15178 HPRT1P1-201ENST00000509498 657 ntBASIC4.42□□□□□ -1.7
TO15178 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.42□□□□□ -1.7
TO15178 AC110760.3-202ENST00000515177 371 ntBASIC4.42□□□□□ -1.7
TO15178 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.42□□□□□ -1.7
TO15178 IGKV1-32-201ENST00000519290 311 ntBASIC4.42□□□□□ -1.7
TO15178 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.42□□□□□ -1.7
TO15178 NDUFS5P6-201ENST00000529136 295 ntBASIC4.42□□□□□ -1.7
TO15178 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TO15178 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TO15178 AC133555.2-201ENST00000550213 292 ntBASIC4.42□□□□□ -1.7
TO15178 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.42□□□□□ -1.7
TO15178 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.42□□□□□ -1.7
TO15178 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TO15178 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.42□□□□□ -1.7
TO15178 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.42□□□□□ -1.7
TO15178 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.42□□□□□ -1.7
TO15178 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TO15178 MIR4436B2-201ENST00000581415 91 ntBASIC4.42□□□□□ -1.7
TO15178 MIR4436B1-201ENST00000583272 91 ntBASIC4.42□□□□□ -1.7
TO15178 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.42□□□□□ -1.7
TO15178 VN1R88P-201ENST00000596787 292 ntBASIC4.42□□□□□ -1.7
TO15178 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.42□□□□□ -1.7
TO15178 AL031320.1-201ENST00000604177 357 ntBASIC4.42□□□□□ -1.7
TO15178 AC034229.4-201ENST00000607861 441 ntBASIC4.42□□□□□ -1.7
TO15178 SNORD91B-202ENST00000608459 222 ntBASIC4.42□□□□□ -1.7
TO15178 AL035461.2-201ENST00000619201 524 ntBASIC4.42□□□□□ -1.7
TO15178 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TO15178 AP000843.1-201ENST00000624880 701 ntBASIC4.42□□□□□ -1.7
TO15178 CR392039.4-201ENST00000624968 501 ntBASIC4.42□□□□□ -1.7
TO15178 AC092608.3-201ENST00000625017 386 ntBASIC4.42□□□□□ -1.7
TO15178 CDRT1-208ENST00000630868 794 ntBASIC4.42□□□□□ -1.7
TO15178 CASC19-206ENST00000641028 1430 ntBASIC4.42□□□□□ -1.7
TO15178 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TO15178 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.42□□□□□ -1.7
TO15178 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TO15178 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TO15178 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TO15178 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TO15178 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TO15178 AL359922.3-201ENST00000624779 1670 ntBASIC4.41□□□□□ -1.7
TO15178 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TO15178 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TO15178 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
TO15178 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TO15178 AL356489.2-201ENST00000566968 3528 ntBASIC4.41□□□□□ -1.7
TO15178 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TO15178 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.41□□□□□ -1.7
TO15178 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.41□□□□□ -1.7
TO15178 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TO15178 RNU1-94P-201ENST00000362627 173 ntBASIC4.41□□□□□ -1.7
TO15178 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TO15178 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TO15178 AL078604.1-201ENST00000404609 466 ntBASIC4.41□□□□□ -1.7
TO15178 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.41□□□□□ -1.7
TO15178 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TO15178 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.41□□□□□ -1.7
TO15178 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.41□□□□□ -1.7
TO15178 TAF13P2-201ENST00000416876 286 ntBASIC4.41□□□□□ -1.7
TO15178 AC234782.4-201ENST00000417646 1048 ntBASIC4.41□□□□□ -1.7
TO15178 BX510359.2-201ENST00000417920 305 ntBASIC4.41□□□□□ -1.7
TO15178 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.41□□□□□ -1.7
TO15178 AC092809.1-201ENST00000441469 474 ntBASIC4.41□□□□□ -1.7
TO15178 RRM2P4-201ENST00000441721 562 ntBASIC4.41□□□□□ -1.7
TO15178 AL031313.1-201ENST00000448435 256 ntBASIC4.41□□□□□ -1.7
TO15178 EXOSC3P1-201ENST00000448649 500 ntBASIC4.41□□□□□ -1.7
TO15178 RHEBP2-201ENST00000450289 600 ntBASIC4.41□□□□□ -1.7
TO15178 AC010733.1-201ENST00000451515 401 ntBASIC4.41□□□□□ -1.7
TO15178 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.41□□□□□ -1.7
TO15178 AC108729.1-201ENST00000487812 947 ntBASIC4.41□□□□□ -1.7
TO15178 AC020890.1-201ENST00000491837 504 ntBASIC4.41□□□□□ -1.7
TO15178 AC073358.1-201ENST00000505671 684 ntBASIC4.41□□□□□ -1.7
TO15178 AC098799.3-201ENST00000506095 438 ntBASIC4.41□□□□□ -1.7
TO15178 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.41□□□□□ -1.7
TO15178 IGBP1P5-201ENST00000507524 1000 ntBASIC4.41□□□□□ -1.7
TO15178 AP001207.2-201ENST00000519490 539 ntBASIC4.41□□□□□ -1.7
TO15178 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.41□□□□□ -1.7
TO15178 AC008562.1-201ENST00000521763 330 ntBASIC4.41□□□□□ -1.7
TO15178 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.41□□□□□ -1.7
TO15178 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.41□□□□□ -1.7
TO15178 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms