Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SDCBPO00560 AC023813.4-201ENST00000607580 580 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 AL135786.2-201ENST00000608422 615 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 MLECP1-201ENST00000615893 709 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 AC067852.7-201ENST00000623270 535 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 AC091905.1-201ENST00000624400 311 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.3□□□□□ -1.88
SDCBPO00560 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.3□□□□□ -1.88
SDCBPO00560 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.3□□□□□ -1.88
SDCBPO00560 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SDCBPO00560 ASNSP1-201ENST00000518311 1939 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SDCBPO00560 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
SDCBPO00560 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.29□□□□□ -1.88
SDCBPO00560 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SDCBPO00560 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SDCBPO00560 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.29□□□□□ -1.88
SDCBPO00560 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SDCBPO00560 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SDCBPO00560 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
SDCBPO00560 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.29□□□□□ -1.88
SDCBPO00560 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.29□□□□□ -1.88
SDCBPO00560 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.29□□□□□ -1.88
SDCBPO00560 RNU6-178P-201ENST00000384631 104 ntBASIC3.29□□□□□ -1.88
SDCBPO00560 MT-RNR1-201ENST00000389680 954 ntBASIC3.29□□□□□ -1.88
SDCBPO00560 AC104297.1-201ENST00000393779 870 ntBASIC3.29□□□□□ -1.88
SDCBPO00560 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.29□□□□□ -1.88
SDCBPO00560 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.29□□□□□ -1.88
SDCBPO00560 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.29□□□□□ -1.88
SDCBPO00560 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.29□□□□□ -1.88
SDCBPO00560 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.29□□□□□ -1.88
SDCBPO00560 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.29□□□□□ -1.88
SDCBPO00560 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.29□□□□□ -1.88
SDCBPO00560 AL133244.1-201ENST00000456007 258 ntBASIC3.29□□□□□ -1.88
SDCBPO00560 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SDCBPO00560 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.29□□□□□ -1.88
SDCBPO00560 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.29□□□□□ -1.88
SDCBPO00560 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.29□□□□□ -1.88
SDCBPO00560 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SDCBPO00560 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SDCBPO00560 CYCSP29-201ENST00000533731 318 ntBASIC3.29□□□□□ -1.88
SDCBPO00560 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.29□□□□□ -1.88
SDCBPO00560 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.29□□□□□ -1.88
SDCBPO00560 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.29□□□□□ -1.88
SDCBPO00560 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.29□□□□□ -1.88
SDCBPO00560 AL133457.1-201ENST00000564251 987 ntBASIC3.29□□□□□ -1.88
SDCBPO00560 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SDCBPO00560 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.29□□□□□ -1.88
SDCBPO00560 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.29□□□□□ -1.88
SDCBPO00560 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.29□□□□□ -1.88
SDCBPO00560 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.29□□□□□ -1.88
SDCBPO00560 AL445423.1-201ENST00000609941 536 ntBASIC3.29□□□□□ -1.88
SDCBPO00560 BX323046.1-201ENST00000610145 535 ntBASIC3.29□□□□□ -1.88
SDCBPO00560 MIR6868-201ENST00000611215 58 ntBASIC3.29□□□□□ -1.88
SDCBPO00560 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.29□□□□□ -1.88
SDCBPO00560 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.29□□□□□ -1.88
SDCBPO00560 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SDCBPO00560 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SDCBPO00560 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SDCBPO00560 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.29□□□□□ -1.88
SDCBPO00560 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SDCBPO00560 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SDCBPO00560 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
SDCBPO00560 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
SDCBPO00560 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SDCBPO00560 AC233968.1-201ENST00000611212 1300 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 CR381670.1-201ENST00000624291 1693 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
SDCBPO00560 RNA5SP399-201ENST00000364003 117 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 HLFP1-201ENST00000402375 499 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 AC016397.1-201ENST00000412463 242 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 RPA2P2-201ENST00000419698 796 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.28□□□□□ -1.88
SDCBPO00560 OR6K4P-201ENST00000423179 955 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.28□□□□□ -1.88
SDCBPO00560 AL691449.1-201ENST00000426570 421 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 AL365396.1-201ENST00000430854 671 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.28□□□□□ -1.88
SDCBPO00560 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.28□□□□□ -1.88
SDCBPO00560 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.28□□□□□ -1.88
SDCBPO00560 MTCO3P20-201ENST00000454926 688 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 TRBV12-2-201ENST00000489763 344 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 AL132838.2-201ENST00000492041 314 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.28□□□□□ -1.88
SDCBPO00560 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.28□□□□□ -1.88
SDCBPO00560 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SDCBPO00560 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.28□□□□□ -1.88
SDCBPO00560 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.28□□□□□ -1.88
SDCBPO00560 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.28□□□□□ -1.88
SDCBPO00560 VTA1P2-201ENST00000520205 911 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.28□□□□□ -1.88
SDCBPO00560 AC090819.1-201ENST00000523800 1111 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.28□□□□□ -1.88
SDCBPO00560 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.28□□□□□ -1.88
SDCBPO00560 AC091516.1-201ENST00000549191 703 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.28□□□□□ -1.88
SDCBPO00560 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SDCBPO00560 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.28□□□□□ -1.88
SDCBPO00560 MIR4700-201ENST00000578311 74 ntBASIC3.28□□□□□ -1.88
SDCBPO00560 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms