Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.67□□□□□ -1.66
O00370 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
O00370 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
O00370 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
O00370 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.67□□□□□ -1.66
O00370 AC139713.2-214ENST00000642059 1811 ntBASIC4.67□□□□□ -1.66
O00370 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.67□□□□□ -1.66
O00370 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
O00370 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
O00370 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
O00370 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
O00370 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
O00370 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
O00370 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
O00370 MFSD8-242ENST00000641690 4199 ntBASIC4.66□□□□□ -1.66
O00370 MIR16-2-201ENST00000362117 81 ntBASIC4.66□□□□□ -1.66
O00370 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
O00370 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
O00370 GCNT6-201ENST00000379591 934 ntBASIC4.66□□□□□ -1.66
O00370 VN1R8P-201ENST00000407739 893 ntBASIC4.66□□□□□ -1.66
O00370 RPS6P14-201ENST00000425165 719 ntBASIC4.66□□□□□ -1.66
O00370 AC068287.1-201ENST00000430283 295 ntBASIC4.66□□□□□ -1.66
O00370 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.66□□□□□ -1.66
O00370 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.66□□□□□ -1.66
O00370 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.66□□□□□ -1.66
O00370 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.66□□□□□ -1.66
O00370 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.66□□□□□ -1.66
O00370 AC006511.1-201ENST00000470614 315 ntBASIC4.66□□□□□ -1.66
O00370 AC107398.1-201ENST00000486904 505 ntBASIC4.66□□□□□ -1.66
O00370 AC013356.1-201ENST00000489027 564 ntBASIC4.66□□□□□ -1.66
O00370 AC104629.1-201ENST00000494226 508 ntBASIC4.66□□□□□ -1.66
O00370 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.66□□□□□ -1.66
O00370 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.66□□□□□ -1.66
O00370 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.66□□□□□ -1.66
O00370 RNU6-334P-201ENST00000517072 102 ntBASIC4.66□□□□□ -1.66
O00370 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.66□□□□□ -1.66
O00370 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
O00370 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.66□□□□□ -1.66
O00370 CBX3P2-202ENST00000583365 535 ntBASIC4.66□□□□□ -1.66
O00370 ELOCP28-201ENST00000590044 317 ntBASIC4.66□□□□□ -1.66
O00370 AC005191.1-201ENST00000603950 358 ntBASIC4.66□□□□□ -1.66
O00370 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
O00370 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.66□□□□□ -1.66
O00370 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.66□□□□□ -1.66
O00370 AC116563.2-201ENST00000624751 535 ntBASIC4.66□□□□□ -1.66
O00370 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
O00370 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
O00370 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
O00370 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.66□□□□□ -1.66
O00370 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
O00370 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
O00370 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
O00370 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
O00370 AC096656.1-201ENST00000623826 1364 ntBASIC4.65□□□□□ -1.66
O00370 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.65□□□□□ -1.66
O00370 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
O00370 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
O00370 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
O00370 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
O00370 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
O00370 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
O00370 SNORA63.3-201ENST00000362682 132 ntBASIC4.65□□□□□ -1.67
O00370 RNU6-792P-201ENST00000363490 107 ntBASIC4.65□□□□□ -1.67
O00370 RNU1-32P-201ENST00000363937 159 ntBASIC4.65□□□□□ -1.67
O00370 SNORD74.4-201ENST00000364129 80 ntBASIC4.65□□□□□ -1.67
O00370 U3.22-201ENST00000391120 215 ntBASIC4.65□□□□□ -1.67
O00370 AC136624.1-201ENST00000400791 413 ntBASIC4.65□□□□□ -1.67
O00370 TAF9BP2-201ENST00000400856 499 ntBASIC4.65□□□□□ -1.67
O00370 RPL31P52-201ENST00000407532 367 ntBASIC4.65□□□□□ -1.67
O00370 AC004552.1-201ENST00000419089 348 ntBASIC4.65□□□□□ -1.67
O00370 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.65□□□□□ -1.67
O00370 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.65□□□□□ -1.67
O00370 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.65□□□□□ -1.67
O00370 AC092691.2-201ENST00000461787 803 ntBASIC4.65□□□□□ -1.67
O00370 RN7SL98P-201ENST00000462271 300 ntBASIC4.65□□□□□ -1.67
O00370 RPS26P3-201ENST00000470205 348 ntBASIC4.65□□□□□ -1.67
O00370 AC090543.2-201ENST00000483963 348 ntBASIC4.65□□□□□ -1.67
O00370 AC011037.1-201ENST00000483964 558 ntBASIC4.65□□□□□ -1.67
O00370 AC004057.1-201ENST00000485827 348 ntBASIC4.65□□□□□ -1.67
O00370 AC092902.1-201ENST00000486999 259 ntBASIC4.65□□□□□ -1.67
O00370 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
O00370 ATP1B1P1-201ENST00000509767 915 ntBASIC4.65□□□□□ -1.67
O00370 HMGB3P13-201ENST00000511263 607 ntBASIC4.65□□□□□ -1.67
O00370 HMGN1P15-201ENST00000513870 295 ntBASIC4.65□□□□□ -1.67
O00370 IFITM8P-201ENST00000522529 394 ntBASIC4.65□□□□□ -1.67
O00370 UBTFL9-201ENST00000534504 1148 ntBASIC4.65□□□□□ -1.67
O00370 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
O00370 AC124068.1-201ENST00000563131 678 ntBASIC4.65□□□□□ -1.67
O00370 HNRNPCP4-201ENST00000571636 900 ntBASIC4.65□□□□□ -1.67
O00370 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.65□□□□□ -1.67
O00370 MIR4716-201ENST00000579628 84 ntBASIC4.65□□□□□ -1.67
O00370 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.65□□□□□ -1.67
O00370 AC005034.4-201ENST00000603612 899 ntBASIC4.65□□□□□ -1.67
O00370 AC120053.1-201ENST00000607706 736 ntBASIC4.65□□□□□ -1.67
O00370 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.65□□□□□ -1.67
O00370 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
O00370 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
O00370 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
O00370 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
O00370 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms