Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC093765.1-201ENST00000603758 881 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC034236.3-201ENST00000605999 461 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC105429.2-201ENST00000610567 517 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 MIR6762-201ENST00000613340 86 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 AC005840.5-201ENST00000619166 599 ntBASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
CHKB-CPT1BH3BT56 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 UBE3AP2-201ENST00000429033 2259 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 SNORD35B-201ENST00000363660 87 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 RN7SKP86-201ENST00000410454 332 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 RN7SKP39-201ENST00000410773 322 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 RNU6-55P-201ENST00000411092 107 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 RNU6-954P-201ENST00000411355 107 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 RNA5SP107-201ENST00000411358 122 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 RPS7P13-201ENST00000413955 498 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AL121776.1-201ENST00000429337 372 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL34P20-201ENST00000442771 351 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AL356121.1-201ENST00000442911 156 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 RPS27P5-201ENST00000444247 244 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 VN1R48P-201ENST00000448149 1036 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 PPIA-203ENST00000451562 544 ntTSL 2 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 RPS15AP1-201ENST00000457423 391 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC010401.1-201ENST00000463867 348 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 RN7SL271P-201ENST00000487601 295 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC109462.1-201ENST00000491087 368 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 KCTD9P5-201ENST00000504141 1170 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC091874.2-201ENST00000505889 720 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 POU5F1P7-201ENST00000508759 541 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 PCBP2P3-201ENST00000509726 843 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 TMEM248P1-201ENST00000510579 951 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 MAL2-208ENST00000523307 556 ntTSL 4 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 SOX5P1-201ENST00000524155 1127 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 NANOGNBP2-201ENST00000544753 553 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC126177.5-201ENST00000549599 178 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 HMGN1P26-201ENST00000558737 303 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC034268.2-201ENST00000571784 482 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AL133393.1-201ENST00000603277 287 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 LLPHP1-201ENST00000603571 367 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC104695.2-201ENST00000605056 775 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 EIF3FP1-201ENST00000613970 806 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AC016957.2-201ENST00000616998 848 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 AL157700.1-201ENST00000561973 1432 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 NMD3P1-201ENST00000439704 1488 ntBASIC2.14□□□□□ -2.07
CHKB-CPT1BH3BT56 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 AC009804.1-201ENST00000400949 179 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 HLFP1-201ENST00000402375 499 ntBASIC2.13□□□□□ -2.07
CHKB-CPT1BH3BT56 MRM2-202ENST00000407040 582 ntTSL 3 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms