Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA1Q9Y5H4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA1Q9Y5H4 AC100778.3-201ENST00000580060 1750 ntBASIC4.53□□□□□ -1.69
PCDHGA1Q9Y5H4 AC025031.4-201ENST00000621248 3271 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 RNU6-609P-201ENST00000365459 107 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 RNU1-82P-201ENST00000390851 165 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 QRSL1P2-201ENST00000418582 964 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 OR5AW1P-201ENST00000426334 1006 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AC093422.3-201ENST00000428506 305 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 CEACAMP1-201ENST00000434624 1035 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AP000949.1-201ENST00000438328 629 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AC122718.1-201ENST00000439448 744 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AC079168.2-201ENST00000453977 416 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 FAM133DP-201ENST00000464802 691 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 RN7SL810P-201ENST00000493031 276 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 HMGB1P23-201ENST00000518743 568 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 MTND1P36-201ENST00000522384 936 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 BNIP3P22-201ENST00000593399 556 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AC233280.2-201ENST00000603917 1070 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AC067959.1-201ENST00000604334 379 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AL353600.1-201ENST00000608148 251 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AP000648.2-201ENST00000624182 404 ntBASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA1Q9Y5H4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 MAPK10-320ENST00000641462 6696 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AL445189.1-201ENST00000405722 338 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 MIR1271-201ENST00000408537 86 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AC073310.1-201ENST00000423226 1033 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 PNRC2P1-201ENST00000423940 420 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 ELOCP11-201ENST00000436690 332 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AC073052.1-201ENST00000440417 714 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 GTF3AP5-201ENST00000442645 697 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 ELOCP16-201ENST00000444494 332 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 RPL6P5-201ENST00000445678 828 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AC025164.1-201ENST00000496249 478 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 HMGB1P21-201ENST00000502313 581 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 NIFKP7-201ENST00000503365 834 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 OR4U1P-201ENST00000554958 912 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AC090312.2-201ENST00000582687 378 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AC125494.3-201ENST00000602759 455 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AL158211.2-201ENST00000607282 395 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AC091979.2-201ENST00000607514 214 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AC023509.5-201ENST00000617434 807 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 ZYXP1-201ENST00000617638 118 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 MTCO1P18-201ENST00000455518 1419 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 AC108467.2-201ENST00000617640 1597 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 MAPK10-286ENST00000641208 8747 ntBASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA1Q9Y5H4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms