Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 BX248409.1-201ENST00000455497 255 ntBASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 AC079841.1-201ENST00000481228 950 ntBASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 SETP14-201ENST00000497538 873 ntBASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 IGBP1P4-201ENST00000503202 879 ntBASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 HMGB1P44-201ENST00000508597 572 ntBASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 PGBD4P4-201ENST00000509673 613 ntBASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 HMGN1P9-201ENST00000515212 298 ntBASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 AC008083.2-201ENST00000546707 476 ntBASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 AC116158.1-201ENST00000560231 2129 ntBASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 AC019322.1-201ENST00000571869 389 ntBASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 MIR4310-201ENST00000582950 57 ntBASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 AL589674.2-201ENST00000604304 337 ntBASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 AC073348.1-201ENST00000623002 331 ntBASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 AC016717.3-201ENST00000624730 554 ntBASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB4Q9Y5E5 HSPA8P14-201ENST00000552265 1805 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 OR10J6P-201ENST00000289731 930 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 Y_RNA.302-201ENST00000364997 102 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 RNU6-1042P-201ENST00000384204 107 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 MIR217-201ENST00000384817 110 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AL034374.1-201ENST00000406329 351 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AC114814.2-201ENST00000419195 485 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 FTLP19-201ENST00000433300 394 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 COX6CP12-201ENST00000446748 202 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 DNAJC19P1-201ENST00000455312 319 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 MTCO3P38-201ENST00000468910 766 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 TRBV8-2-201ENST00000475637 270 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 IGLVIV-64-201ENST00000518581 301 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AC025881.1-201ENST00000518851 512 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 DUX4L52-201ENST00000549363 777 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 OR11J2P-201ENST00000555298 907 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 VN1R92P-201ENST00000598511 928 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AC091946.2-201ENST00000606105 291 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AC244107.2-201ENST00000611773 76 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AL357080.1-201ENST00000617394 239 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 MIR8080-201ENST00000622224 89 ntBASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB4Q9Y5E5 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms