Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 VN1R74P-201ENST00000613259 503 ntBASIC5.23□□□□□ -1.57
DKK3Q9UBP4 MIR6839-201ENST00000620425 113 ntBASIC5.23□□□□□ -1.57
DKK3Q9UBP4 AC079248.2-201ENST00000623779 326 ntBASIC5.23□□□□□ -1.57
DKK3Q9UBP4 AP001784.1-201ENST00000624107 428 ntBASIC5.23□□□□□ -1.57
DKK3Q9UBP4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.23□□□□□ -1.57
DKK3Q9UBP4 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.23□□□□□ -1.57
DKK3Q9UBP4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.23□□□□□ -1.57
DKK3Q9UBP4 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DKK3Q9UBP4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DKK3Q9UBP4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
DKK3Q9UBP4 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
DKK3Q9UBP4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
DKK3Q9UBP4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
DKK3Q9UBP4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DKK3Q9UBP4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.23□□□□□ -1.57
DKK3Q9UBP4 ASNSP1-201ENST00000518311 1939 ntBASIC5.23□□□□□ -1.57
DKK3Q9UBP4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DKK3Q9UBP4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
DKK3Q9UBP4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DKK3Q9UBP4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC091046.3-201ENST00000631455 1574 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC131971.1-201ENST00000332881 1482 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 NACA3P-201ENST00000359690 648 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 RNU6-304P-201ENST00000364855 107 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 RNU6-157P-201ENST00000383957 107 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 SNORA56-201ENST00000383966 129 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 EIF4A1P3-201ENST00000411521 244 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AL031779.1-201ENST00000415663 330 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 MTCO3P30-201ENST00000426425 670 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 RPL23AP4-201ENST00000427757 463 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AL035407.1-201ENST00000429211 571 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 VN1R54P-201ENST00000435210 1049 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC092647.2-201ENST00000452998 253 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 HIGD1AP8-201ENST00000453927 274 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 RPL35AP28-201ENST00000459730 331 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 HIGD1AP18-201ENST00000520730 278 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC010198.2-201ENST00000550612 259 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC135507.1-201ENST00000607214 561 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AP002799.1-201ENST00000623552 423 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 THAP12P4-201ENST00000528321 2266 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 ZNF542P-204ENST00000482727 1305 ntBASIC5.22□□□□□ -1.57
DKK3Q9UBP4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
DKK3Q9UBP4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.21□□□□□ -1.57
DKK3Q9UBP4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
DKK3Q9UBP4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
DKK3Q9UBP4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.21□□□□□ -1.57
DKK3Q9UBP4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
DKK3Q9UBP4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
DKK3Q9UBP4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
DKK3Q9UBP4 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
DKK3Q9UBP4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.21□□□□□ -1.58
DKK3Q9UBP4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.21□□□□□ -1.58
DKK3Q9UBP4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
DKK3Q9UBP4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
DKK3Q9UBP4 SNURFL-201ENST00000309296 343 ntBASIC5.21□□□□□ -1.58
DKK3Q9UBP4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
DKK3Q9UBP4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms