Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SEPT7P3-201ENST00000455017 621 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 MTND2P28-201ENST00000457540 1044 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 RPL31P3-201ENST00000458430 332 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 GYG1P1-201ENST00000460864 698 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 RN7SL443P-201ENST00000464331 290 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VTA1Q9NP79 ACTG1P13-201ENST00000486987 1043 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 RN7SL814P-201ENST00000487715 300 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 HNRNPKP5-201ENST00000515300 253 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 RNU6-232P-201ENST00000517144 64 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 AP000859.1-201ENST00000525536 307 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 UBE2NP1-201ENST00000545592 458 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 BNIP3P1-201ENST00000547295 580 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC124312.6-202ENST00000623624 418 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC068620.4-201ENST00000636730 1182 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC092162.3-201ENST00000624511 1624 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 AL603750.1-201ENST00000624216 1717 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VTA1Q9NP79 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC138907.8-201ENST00000623981 2256 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VTA1Q9NP79 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VTA1Q9NP79 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 CASC19-204ENST00000641001 2055 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VTA1Q9NP79 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VTA1Q9NP79 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 RNU6-621P-201ENST00000364752 109 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VTA1Q9NP79 ATP5F1P3-201ENST00000397213 657 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 RNU6-757P-201ENST00000410334 100 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 RPL7P11-201ENST00000437586 658 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 AL445567.1-201ENST00000439121 144 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 ACTR3P2-201ENST00000439585 1257 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 AL606662.1-201ENST00000445763 553 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 RPS29P33-201ENST00000456717 146 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 AC006463.2-201ENST00000473326 348 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 BZW1P2-201ENST00000473537 826 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 RN7SL319P-201ENST00000480656 221 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 AC111000.2-201ENST00000507775 550 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 AC048346.1-201ENST00000510247 144 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VTA1Q9NP79 AC010587.2-201ENST00000511727 448 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VTA1Q9NP79 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 AC122133.1-201ENST00000613964 233 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 AC138965.3-201ENST00000623875 498 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VTA1Q9NP79 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VTA1Q9NP79 AC134882.1-201ENST00000603738 1676 ntBASIC5.75□□□□□ -1.49
VTA1Q9NP79 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VTA1Q9NP79 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VTA1Q9NP79 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
VTA1Q9NP79 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VTA1Q9NP79 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VTA1Q9NP79 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
VTA1Q9NP79 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VTA1Q9NP79 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 AC093849.1-201ENST00000563631 2209 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VTA1Q9NP79 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VTA1Q9NP79 RNU6-1066P-201ENST00000363573 105 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 RNU6-931P-201ENST00000363850 107 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VTA1Q9NP79 RNU6-1300P-201ENST00000391046 108 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 AL590084.2-201ENST00000401481 382 ntBASIC5.74□□□□□ -1.49
VTA1Q9NP79 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.74□□□□□ -1.49
VTA1Q9NP79 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms