Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM4Q9C037 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM4Q9C037 AL049555.1-201ENST00000562834 1933 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 AL136164.3-201ENST00000624429 3978 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 AC007529.1-201ENST00000418574 2178 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM4Q9C037 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM4Q9C037 AC125257.1-201ENST00000560400 2930 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 HSPA8P17-201ENST00000427029 1382 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM4Q9C037 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TRIM4Q9C037 AL929601.4-201ENST00000613011 1341 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM4Q9C037 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM4Q9C037 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM4Q9C037 XIAPP3-201ENST00000312918 795 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 MIR372-201ENST00000362225 67 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 SNORA62.2-201ENST00000364672 152 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 RNU1-44P-201ENST00000384453 163 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 AL022722.2-201ENST00000402519 180 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 RN7SKP267-201ENST00000410381 285 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 RPL23AP26-201ENST00000412728 464 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM4Q9C037 RAB9AP4-201ENST00000415230 609 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 CRYBB2P1-203ENST00000415709 538 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 AC013268.2-201ENST00000420753 337 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 RPL7P53-201ENST00000421245 739 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 RPS20P1-201ENST00000434853 354 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 AL353597.2-202ENST00000434901 373 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM4Q9C037 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM4Q9C037 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM4Q9C037 MTND4LP2-201ENST00000502312 285 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM4Q9C037 KCTD9P6-201ENST00000522306 950 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM4Q9C037 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM4Q9C037 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM4Q9C037 AC017076.1-201ENST00000607613 578 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM4Q9C037 AL451142.2-201ENST00000429076 2090 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM4Q9C037 NOL8P1-201ENST00000508336 3529 ntBASIC4.29□□□□□ -1.72
TRIM4Q9C037 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM4Q9C037 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM4Q9C037 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM4Q9C037 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM4Q9C037 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 AC092162.3-201ENST00000624511 1624 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM4Q9C037 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM4Q9C037 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 SNORA71.2-201ENST00000364941 134 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 RNA5SP283-201ENST00000365604 119 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 PTMAP2-201ENST00000397627 327 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 RPS29P17-201ENST00000430795 166 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 CDY14P-201ENST00000431260 1014 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 PRELID3BP10-201ENST00000431957 584 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 AF228730.2-201ENST00000438784 848 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 YWHAZP2-201ENST00000440317 728 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 CDY12P-201ENST00000440679 1015 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 HSFY6P-201ENST00000445573 403 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 CDY13P-201ENST00000445813 1015 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 CDY23P-201ENST00000451661 1014 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 snoU13.24-201ENST00000458998 104 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 AC079804.1-201ENST00000461922 436 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 UQCRHP4-201ENST00000471686 272 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM4Q9C037 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 AC010476.1-201ENST00000519111 851 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 AC090515.3-201ENST00000560431 315 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM4Q9C037 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 AC091178.1-203ENST00000584586 279 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 AL133338.2-201ENST00000604292 736 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 AC023813.4-201ENST00000607580 580 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 U3.53-201ENST00000628922 216 ntBASIC4.28□□□□□ -1.72
TRIM4Q9C037 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM4Q9C037 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TRIM4Q9C037 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM4Q9C037 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM4Q9C037 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.28□□□□□ -1.73
TRIM4Q9C037 AC005261.4-201ENST00000600047 1385 ntBASIC4.27□□□□□ -1.73
TRIM4Q9C037 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM4Q9C037 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM4Q9C037 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms