Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 AL133243.3-201ENST00000617415 3004 ntBASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 SNORD35B-201ENST00000363660 87 ntBASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 MIR200C-201ENST00000384980 68 ntBASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 HMGB3P10-201ENST00000434734 572 ntBASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 TPTE2P3-201ENST00000441562 1189 ntBASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 AC133473.1-201ENST00000455173 299 ntBASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 SEPT14P1-201ENST00000458703 648 ntBASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 RN7SKP34-201ENST00000516142 244 ntBASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 SCARNA13-201ENST00000516672 275 ntBASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 RNU1-45P-201ENST00000517191 141 ntBASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 AC012417.1-201ENST00000582307 1039 ntBASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 AL451044.1-201ENST00000604867 238 ntBASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 AC233309.1-201ENST00000619522 751 ntBASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 LARP1BP1-201ENST00000506036 1359 ntBASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 AC097504.1-201ENST00000515103 2415 ntBASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
UPF3BQ9BZI7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 Z82217.1-201ENST00000625157 8149 ntBASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 MIR383-201ENST00000362257 73 ntBASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 JKAMPP1-201ENST00000413804 919 ntBASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 AC011742.1-201ENST00000431448 434 ntBASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 AL050321.1-201ENST00000432363 400 ntBASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 VN1R25P-201ENST00000443385 738 ntBASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 VN1R40P-201ENST00000455196 941 ntBASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 RPS20P4-201ENST00000461659 355 ntBASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 AC105036.1-201ENST00000566222 271 ntBASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 MIR5684-201ENST00000585074 65 ntBASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 AC104662.1-201ENST00000604448 511 ntBASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 AC015722.2-201ENST00000622210 551 ntBASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 AC090506.2-201ENST00000624521 419 ntBASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPF3BQ9BZI7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.84□□□□□ -1.64
UPF3BQ9BZI7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
UPF3BQ9BZI7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 RNU11-4P-201ENST00000391149 133 ntBASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 CRYBB2P1-203ENST00000415709 538 ntBASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 RPL23AP38-201ENST00000423801 469 ntBASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 RPL7P2-201ENST00000427639 268 ntBASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 HMGB3P22-202ENST00000451823 572 ntBASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 RPS26P15-201ENST00000488067 348 ntBASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 SULT1C2P2-201ENST00000562517 294 ntBASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 MIR4286-201ENST00000580651 93 ntBASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
UPF3BQ9BZI7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 CUL4AP1-201ENST00000514750 1863 ntBASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 MIR208A-201ENST00000362287 71 ntBASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 HSPD1P16-201ENST00000402302 394 ntBASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 RN7SKP159-201ENST00000410657 292 ntBASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 BX119904.1-201ENST00000432026 348 ntBASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 RPS4XP4-201ENST00000443195 763 ntBASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 FGF7P3-201ENST00000454645 303 ntBASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 HSPE1P22-201ENST00000456856 327 ntBASIC4.82□□□□□ -1.64
UPF3BQ9BZI7 AC091564.1-201ENST00000464563 479 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms