Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSX3Q99909 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SSX3Q99909 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SSX3Q99909 RNA5SP428-201ENST00000365129 132 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SSX3Q99909 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSX3Q99909 AP002530.1-201ENST00000405705 684 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.07□□□□□ -1.76
SSX3Q99909 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.07□□□□□ -1.76
SSX3Q99909 NUP35P2-201ENST00000416748 943 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 RPS15AP40-201ENST00000419621 391 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 RPL7P57-201ENST00000423238 740 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.07□□□□□ -1.76
SSX3Q99909 AC092809.1-201ENST00000441469 474 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 RPL7AP61-201ENST00000443410 636 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 OR7E125P-201ENST00000443450 846 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.07□□□□□ -1.76
SSX3Q99909 AC004980.3-201ENST00000447046 365 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.07□□□□□ -1.76
SSX3Q99909 RPL35AP28-201ENST00000459730 331 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AC104689.1-201ENST00000473356 768 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AC087385.1-201ENST00000475062 312 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.07□□□□□ -1.76
SSX3Q99909 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.07□□□□□ -1.76
SSX3Q99909 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.07□□□□□ -1.76
SSX3Q99909 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX3Q99909 RNA5SP249-201ENST00000516127 99 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX3Q99909 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.07□□□□□ -1.76
SSX3Q99909 BRD9P1-201ENST00000529855 560 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AC068339.2-201ENST00000534395 618 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.07□□□□□ -1.76
SSX3Q99909 GSTP1P1-201ENST00000548078 319 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX3Q99909 AL442163.2-201ENST00000553912 710 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX3Q99909 AC095057.3-201ENST00000567102 1157 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX3Q99909 AC104072.1-201ENST00000568817 668 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AC090312.2-201ENST00000582687 378 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX3Q99909 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.07□□□□□ -1.76
SSX3Q99909 DNAJC19P3-201ENST00000594491 331 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX3Q99909 EIF1P6-201ENST00000600054 334 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AC116651.1-201ENST00000609724 556 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AL627230.1-201ENST00000613077 211 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AL591926.8-201ENST00000616876 211 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AC023509.5-201ENST00000617434 807 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.07□□□□□ -1.76
SSX3Q99909 AC106858.1-201ENST00000637497 429 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
SSX3Q99909 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SSX3Q99909 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSX3Q99909 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSX3Q99909 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSX3Q99909 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.07□□□□□ -1.76
SSX3Q99909 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.07□□□□□ -1.76
SSX3Q99909 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SSX3Q99909 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSX3Q99909 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSX3Q99909 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX3Q99909 NMD3P1-201ENST00000439704 1488 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX3Q99909 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.06□□□□□ -1.76
SSX3Q99909 ZNF33CP-201ENST00000432492 2030 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSX3Q99909 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX3Q99909 RN7SKP95-201ENST00000362860 303 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 RNU6-1339P-201ENST00000363574 91 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 RPL22P22-201ENST00000395439 379 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 DNAJC19P6-201ENST00000401853 280 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AL021331.1-201ENST00000402817 582 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 HMGB3P19-201ENST00000403971 560 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AL035079.1-201ENST00000405210 287 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 HDGFP1-201ENST00000405943 252 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AC069282.1-201ENST00000411911 526 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 COX6B1P1-201ENST00000415962 213 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 CHEK2P3-201ENST00000416118 248 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AC104837.2-201ENST00000427236 424 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 COX6CP13-201ENST00000428703 226 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.06□□□□□ -1.76
SSX3Q99909 RHOT1P3-201ENST00000436571 331 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX3Q99909 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 HSFY3P-201ENST00000444242 1191 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AC112498.1-201ENST00000444401 332 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 GXYLT1P1-201ENST00000446657 490 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.06□□□□□ -1.76
SSX3Q99909 MRPL35P4-201ENST00000453682 566 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX3Q99909 GTF2IP12-201ENST00000456547 356 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX3Q99909 RPS3AP41-201ENST00000462701 778 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.06□□□□□ -1.76
SSX3Q99909 RPS17P11-201ENST00000474297 293 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 RPL7P16-201ENST00000479738 738 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AC083982.1-201ENST00000485679 344 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 DEFB109F-201ENST00000491870 277 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms