Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AC006511.1-201ENST00000470614 315 ntBASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 RPL32P34-201ENST00000486380 400 ntBASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 RNU7-143P-201ENST00000516781 65 ntBASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AL117339.4-201ENST00000608335 7063 ntBASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AC022695.1-201ENST00000522089 237 ntBASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 MRPS21P9-201ENST00000571150 257 ntBASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AC025627.2-201ENST00000576220 160 ntBASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 MIR4472-2-201ENST00000582069 67 ntBASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AC234782.5-201ENST00000617723 324 ntBASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 RNU4-35P-201ENST00000362588 141 ntBASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AC234772.1-201ENST00000377927 937 ntBASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 SNORD66.1-201ENST00000391230 76 ntBASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AC011611.1-201ENST00000552179 197 ntBASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 AP003122.5-201ENST00000527668 3766 ntBASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSMD1Q96PZ7 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AC005019.1-201ENST00000436455 431 ntBASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 SNORD105B-201ENST00000458770 79 ntBASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 UBE2NP1-201ENST00000545592 458 ntBASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AL451142.2-201ENST00000429076 2090 ntBASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 SNORD17-201ENST00000390930 237 ntBASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AC103843.2-201ENST00000530523 682 ntBASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AC079171.1-201ENST00000568788 914 ntBASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AL021877.2-201ENST00000624442 10684 ntBASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AL034403.1-201ENST00000399414 885 ntBASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 COTL1P1-201ENST00000422309 375 ntBASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AC113192.3-201ENST00000529152 742 ntBASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AL157394.1-201ENST00000562983 1224 ntBASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 AC095038.2-201ENST00000621464 1070 ntBASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSMD1Q96PZ7 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AC005183.1-201ENST00000603687 1979 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 RNU1-44P-201ENST00000384453 163 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AL161631.1-201ENST00000417933 486 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 Z97055.1-201ENST00000419730 712 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AC091862.1-201ENST00000438016 1100 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 VN1R32P-201ENST00000452234 905 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 CYCSP28-201ENST00000534284 321 ntBASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC3.16□□□□□ -1.9
CSMD1Q96PZ7 AL157762.1-201ENST00000619612 415 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms