Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 RPL12P3-201ENST00000440080 396 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 RPL23AP43-201ENST00000446445 471 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 VN1R32P-201ENST00000452234 905 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 HSFY5P-201ENST00000453726 309 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AC092905.1-201ENST00000467527 949 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AC093270.2-201ENST00000486157 792 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AC105233.1-201ENST00000498840 781 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 IGBP1P5-201ENST00000507524 1000 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 RNU6-1102P-201ENST00000516149 96 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 HMGB1P23-201ENST00000518743 568 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 PTP4A1P6-201ENST00000531034 478 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AP000919.1-202ENST00000581139 1264 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 MIR4436B2-201ENST00000581415 91 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 MIR4436B1-201ENST00000583272 91 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 EIF1P6-201ENST00000600054 334 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AC068790.7-201ENST00000602347 528 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 MIR6864-201ENST00000617935 70 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AC097372.4-201ENST00000625025 466 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AL590396.2-201ENST00000636511 1041 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AC017104.5-201ENST00000637647 639 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 AC138393.1-206ENST00000540997 1886 ntBASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
PDLIM5Q96HC4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 NSRP1P1-201ENST00000444067 1693 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 ENSAP3-201ENST00000312710 333 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 SNORD113.2-201ENST00000364166 89 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 SNORA70F-201ENST00000384142 135 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 ATF1P1-201ENST00000406040 927 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 VN1R42P-201ENST00000424651 344 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 ELOCP6-201ENST00000429066 328 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 RPL37P1-201ENST00000432310 284 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AL049745.1-201ENST00000433953 286 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AL162591.2-201ENST00000449634 317 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 ELOCP12-201ENST00000458706 328 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 S100A11P1-201ENST00000477525 312 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 RPL32P9-201ENST00000487963 407 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 RN7SKP96-201ENST00000516948 297 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AC083923.1-201ENST00000523708 376 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 ATP5F1P7-201ENST00000567330 760 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 RPL23AP97-201ENST00000568955 471 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 BNIP3P39-201ENST00000601077 554 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AC103792.1-201ENST00000603591 919 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AC105148.1-201ENST00000604961 409 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AC010680.4-201ENST00000605334 543 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 FAM25E-202ENST00000608562 189 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AC084824.5-201ENST00000612009 413 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 RMST_10.1-201ENST00000616309 154 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AC099669.2-201ENST00000616549 437 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AC073569.3-201ENST00000619055 682 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 AP006248.3-201ENST00000623580 594 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 ERCC6-202ENST00000374127 1782 ntBASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM5Q96HC4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PDLIM5Q96HC4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms