Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 SCARNA4.1-201ENST00000628597 123 ntBASIC6.33□□□□□ -1.4
TOPBP1Q92547 ATE1-AS1-202ENST00000636460 506 ntBASIC6.33□□□□□ -1.4
TOPBP1Q92547 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
TOPBP1Q92547 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
TOPBP1Q92547 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TOPBP1Q92547 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TOPBP1Q92547 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TOPBP1Q92547 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
TOPBP1Q92547 Y_RNA.500-201ENST00000384466 111 ntBASIC6.32□□□□□ -1.4
TOPBP1Q92547 Y_RNA.510-201ENST00000384511 114 ntBASIC6.32□□□□□ -1.4
TOPBP1Q92547 VN1R8P-201ENST00000407739 893 ntBASIC6.32□□□□□ -1.4
TOPBP1Q92547 DEFB109F-201ENST00000491870 277 ntBASIC6.32□□□□□ -1.4
TOPBP1Q92547 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.32□□□□□ -1.4
TOPBP1Q92547 OR7E13P-201ENST00000526052 910 ntBASIC6.32□□□□□ -1.4
TOPBP1Q92547 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TOPBP1Q92547 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.32□□□□□ -1.4
TOPBP1Q92547 AC133552.5-201ENST00000604266 540 ntBASIC6.32□□□□□ -1.4
TOPBP1Q92547 AL139089.1-201ENST00000620372 975 ntBASIC6.32□□□□□ -1.4
TOPBP1Q92547 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TOPBP1Q92547 MTCO1P46-201ENST00000451639 1491 ntBASIC6.32□□□□□ -1.4
TOPBP1Q92547 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC6.32□□□□□ -1.4
TOPBP1Q92547 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.32□□□□□ -1.4
TOPBP1Q92547 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
TOPBP1Q92547 AL442128.2-201ENST00000620246 1824 ntBASIC6.31□□□□□ -1.4
TOPBP1Q92547 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
TOPBP1Q92547 RNU1-15P-201ENST00000353977 144 ntBASIC6.31□□□□□ -1.4
TOPBP1Q92547 SNORA48.5-201ENST00000391143 135 ntBASIC6.31□□□□□ -1.4
TOPBP1Q92547 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.31□□□□□ -1.4
TOPBP1Q92547 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.31□□□□□ -1.4
TOPBP1Q92547 AC010740.1-201ENST00000417035 684 ntBASIC6.31□□□□□ -1.4
TOPBP1Q92547 RPL32P34-201ENST00000486380 400 ntBASIC6.31□□□□□ -1.4
TOPBP1Q92547 AGGF1P3-201ENST00000493675 1213 ntBASIC6.31□□□□□ -1.4
TOPBP1Q92547 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC6.31□□□□□ -1.4
TOPBP1Q92547 AC010503.3-201ENST00000594355 540 ntBASIC6.31□□□□□ -1.4
TOPBP1Q92547 AL354760.1-201ENST00000608357 643 ntBASIC6.31□□□□□ -1.4
TOPBP1Q92547 MFSD8-236ENST00000641509 4050 ntBASIC6.31□□□□□ -1.4
TOPBP1Q92547 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.31□□□□□ -1.4
TOPBP1Q92547 BDP1P-201ENST00000582658 1990 ntBASIC6.31□□□□□ -1.4
TOPBP1Q92547 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
TOPBP1Q92547 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
TOPBP1Q92547 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TOPBP1Q92547 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
TOPBP1Q92547 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC6.31□□□□□ -1.4
TOPBP1Q92547 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TOPBP1Q92547 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC6.3□□□□□ -1.4
TOPBP1Q92547 EIF4BP1-201ENST00000554881 351 ntBASIC6.3□□□□□ -1.4
TOPBP1Q92547 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC6.3□□□□□ -1.4
TOPBP1Q92547 MIR7112-201ENST00000616126 65 ntBASIC6.3□□□□□ -1.4
TOPBP1Q92547 SMCR2_2.1-201ENST00000619783 161 ntBASIC6.3□□□□□ -1.4
TOPBP1Q92547 AC015722.2-201ENST00000622210 551 ntBASIC6.3□□□□□ -1.4
TOPBP1Q92547 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC6.3□□□□□ -1.4
TOPBP1Q92547 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.3□□□□□ -1.4
TOPBP1Q92547 THAP12P5-201ENST00000405864 2275 ntBASIC6.3□□□□□ -1.4
TOPBP1Q92547 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.3□□□□□ -1.4
TOPBP1Q92547 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TOPBP1Q92547 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.3□□□□□ -1.4
TOPBP1Q92547 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
TOPBP1Q92547 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
TOPBP1Q92547 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
TOPBP1Q92547 AC096644.3-201ENST00000416788 338 ntBASIC6.3□□□□□ -1.4
TOPBP1Q92547 DBIP2-201ENST00000419076 262 ntBASIC6.3□□□□□ -1.4
TOPBP1Q92547 AJ239321.1-201ENST00000424255 564 ntBASIC6.3□□□□□ -1.4
TOPBP1Q92547 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC6.3□□□□□ -1.4
TOPBP1Q92547 MTCO1P45-201ENST00000431457 267 ntBASIC6.3□□□□□ -1.4
TOPBP1Q92547 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.3□□□□□ -1.4
TOPBP1Q92547 AC084198.1-201ENST00000477747 402 ntBASIC6.3□□□□□ -1.4
TOPBP1Q92547 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.3□□□□□ -1.4
TOPBP1Q92547 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.3□□□□□ -1.4
TOPBP1Q92547 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC6.3□□□□□ -1.4
TOPBP1Q92547 AC023509.5-201ENST00000617434 807 ntBASIC6.3□□□□□ -1.4
TOPBP1Q92547 AL133383.2-201ENST00000622958 2336 ntBASIC6.3□□□□□ -1.4
TOPBP1Q92547 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TOPBP1Q92547 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC6.29□□□□□ -1.4
TOPBP1Q92547 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
TOPBP1Q92547 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
TOPBP1Q92547 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.29□□□□□ -1.4
TOPBP1Q92547 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.29□□□□□ -1.4
TOPBP1Q92547 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TOPBP1Q92547 RNU4-35P-201ENST00000362588 141 ntBASIC6.29□□□□□ -1.4
TOPBP1Q92547 MIR195-201ENST00000385194 87 ntBASIC6.29□□□□□ -1.4
TOPBP1Q92547 HSFY4P-201ENST00000415994 1181 ntBASIC6.29□□□□□ -1.4
TOPBP1Q92547 BTF3P5-201ENST00000457252 467 ntBASIC6.29□□□□□ -1.4
TOPBP1Q92547 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.29□□□□□ -1.4
TOPBP1Q92547 AC010591.1-201ENST00000603941 649 ntBASIC6.29□□□□□ -1.4
TOPBP1Q92547 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
TOPBP1Q92547 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TOPBP1Q92547 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
TOPBP1Q92547 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
TOPBP1Q92547 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.28□□□□□ -1.4
TOPBP1Q92547 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.28□□□□□ -1.4
TOPBP1Q92547 AC022146.1-201ENST00000595307 847 ntBASIC6.28□□□□□ -1.4
TOPBP1Q92547 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.28□□□□□ -1.4
TOPBP1Q92547 AC095038.2-201ENST00000621464 1070 ntBASIC6.28□□□□□ -1.4
TOPBP1Q92547 AP000553.6-201ENST00000641242 118 ntBASIC6.28□□□□□ -1.4
TOPBP1Q92547 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC6.28□□□□□ -1.4
TOPBP1Q92547 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.28□□□□□ -1.4
TOPBP1Q92547 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TOPBP1Q92547 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TOPBP1Q92547 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TOPBP1Q92547 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms