Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MIR6862-2-201ENST00000614755 70 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AL591926.8-201ENST00000616876 211 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AC006840.1-201ENST00000623069 542 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AC099494.2-201ENST00000623371 978 ntBASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4AQ8WYN0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AP000526.1-201ENST00000603308 1388 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 ZNF542P-204ENST00000482727 1305 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 IGKV7-3-201ENST00000357453 298 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 RNU6-623P-201ENST00000363143 105 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 SNORD116-4-201ENST00000384733 96 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 EI24P3-201ENST00000399046 1062 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AL021407.1-201ENST00000404531 386 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 MIR1303-201ENST00000408625 86 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 USP9YP22-201ENST00000438971 294 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 ELOCP8-201ENST00000439309 332 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 ELOCP15-201ENST00000442090 332 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 KNOP1P3-201ENST00000446933 426 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 BX248409.1-201ENST00000455497 255 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 RNA5SP103-201ENST00000459503 118 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 RN7SL174P-201ENST00000475578 289 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 RPL7P39-201ENST00000481157 744 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AC073358.1-201ENST00000505671 684 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AC021146.8-201ENST00000507455 733 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AC105185.1-201ENST00000518705 535 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AP003033.1-201ENST00000527244 415 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 HIGD1AP17-201ENST00000554576 276 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AC087477.6-201ENST00000559595 843 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AC079171.1-201ENST00000568788 914 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AC022884.3-201ENST00000579571 248 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 RN7SL753P-201ENST00000581238 290 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 VN1R82P-201ENST00000601481 356 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AL451074.6-201ENST00000608512 729 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 MIR8069-1-201ENST00000616627 86 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 MIR8069-2-201ENST00000621412 86 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AL359757.1-201ENST00000623176 255 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AC091931.1-201ENST00000623488 728 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AC091965.5-201ENST00000624785 342 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AF001550.2-201ENST00000636643 217 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 AP001642.1-201ENST00000624727 2117 ntBASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
ATG4AQ8WYN0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
ATG4AQ8WYN0 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.09□□□□□ -1.6
ATG4AQ8WYN0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.09□□□□□ -1.6
ATG4AQ8WYN0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
ATG4AQ8WYN0 AC097063.1-201ENST00000426714 1797 ntBASIC5.09□□□□□ -1.6
ATG4AQ8WYN0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 AC068870.3-201ENST00000625077 2536 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 DDX43P2-201ENST00000604753 1354 ntBASIC5.08□□□□□ -1.6
ATG4AQ8WYN0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms