Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.55□□□□□ -1.68
RAB40AQ8WXH6 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.55□□□□□ -1.68
RAB40AQ8WXH6 AC021171.1-201ENST00000603137 706 ntBASIC4.55□□□□□ -1.68
RAB40AQ8WXH6 DPRXP5-201ENST00000604662 539 ntBASIC4.55□□□□□ -1.68
RAB40AQ8WXH6 AC121761.2-201ENST00000617300 689 ntBASIC4.55□□□□□ -1.68
RAB40AQ8WXH6 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.55□□□□□ -1.68
RAB40AQ8WXH6 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.55□□□□□ -1.68
RAB40AQ8WXH6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.55□□□□□ -1.68
RAB40AQ8WXH6 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RAB40AQ8WXH6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RAB40AQ8WXH6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RAB40AQ8WXH6 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RAB40AQ8WXH6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAB40AQ8WXH6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RAB40AQ8WXH6 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.55□□□□□ -1.68
RAB40AQ8WXH6 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC025125.1-201ENST00000624743 1922 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC011155.1-201ENST00000316512 456 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 RNU6-492P-201ENST00000363035 104 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 RNU5D-1-201ENST00000363299 116 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AL121978.1-201ENST00000402778 359 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 MIR1178-201ENST00000408396 91 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 BMS1P13-201ENST00000417301 885 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 BOLA3P4-201ENST00000418151 400 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC013429.2-201ENST00000418798 781 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AL133325.1-201ENST00000421090 382 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 BX510359.3-201ENST00000422168 306 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AL139421.1-201ENST00000423010 169 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 USP9YP11-201ENST00000427537 717 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC009238.2-201ENST00000431026 355 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 RPL7L1P9-201ENST00000431298 745 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 CYCSP6-201ENST00000434498 302 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC234781.3-201ENST00000452540 973 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 HMGN3P1-201ENST00000453847 193 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AL035090.1-201ENST00000454835 332 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC011225.1-201ENST00000457751 369 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 RN7SL189P-201ENST00000468631 289 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 RN7SL30P-201ENST00000488416 306 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC109445.1-201ENST00000512356 383 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 NDUFB4P12-201ENST00000513465 390 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 RNA5SP34-201ENST00000516887 130 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 SCARNA16.4-201ENST00000516956 187 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AL049779.2-201ENST00000553847 315 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 MTCYBP27-201ENST00000555160 670 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 EIF5A2P1-201ENST00000564027 460 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AL132657.2-201ENST00000564417 358 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC005341.1-201ENST00000571086 708 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 MIR1269B-201ENST00000580405 75 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC095055.1-201ENST00000603472 1113 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AL162431.4-201ENST00000604674 411 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC000068.2-201ENST00000608816 460 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC069209.1-201ENST00000619282 651 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 MTND2P41-201ENST00000637599 773 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AC104454.1-201ENST00000421341 1401 ntBASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms