Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 RNU1-108P-201ENST00000362556 161 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 MIR659-201ENST00000384963 97 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 HMGB3P31-201ENST00000413333 595 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 UQCRBP1-201ENST00000421129 336 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 MTND2P11-201ENST00000423638 648 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 AC073335.1-201ENST00000427776 363 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 USP9YP9-201ENST00000429406 715 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 RPL12P28-201ENST00000430852 489 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 AL359265.2-201ENST00000434367 631 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 AL512661.1-201ENST00000434586 1253 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 ARL5AP2-201ENST00000444698 533 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 AC239809.1-201ENST00000450470 217 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 AC008897.1-201ENST00000494006 347 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 UBTFL9-201ENST00000534504 1148 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 RN7SL690P-201ENST00000582087 240 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 AL161616.1-201ENST00000611867 286 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 AC023509.5-201ENST00000617434 807 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 AP005019.3-201ENST00000620418 560 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 CR392039.4-201ENST00000624968 501 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 MFSD8-213ENST00000641134 1327 ntBASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
TRAF3IP1Q8TDR0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AC067945.1-201ENST00000342609 618 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 SNORD113.2-201ENST00000364166 89 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 OR6K3-202ENST00000368146 996 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 ATP5F1P6-201ENST00000402768 767 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 RN7SKP167-201ENST00000411047 285 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 SNORA74C-2-201ENST00000411179 201 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AL450992.3-201ENST00000413192 568 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AL139128.1-201ENST00000413921 941 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 SNRPFP1-201ENST00000414761 252 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AC073310.1-201ENST00000423226 1033 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 ARL2BPP10-201ENST00000446487 531 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 RPL35AP28-201ENST00000459730 331 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 PRELID3BP7-201ENST00000503606 469 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AC106806.2-201ENST00000509365 500 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AC008694.2-201ENST00000517591 306 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 IGKV2-36-201ENST00000519999 223 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 MTND2P7-201ENST00000521337 640 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AL137100.1-201ENST00000556703 1620 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 MIR4716-201ENST00000579628 84 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AL139286.1-201ENST00000604465 483 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 MIR8084-201ENST00000614105 89 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 AC009237.17-201ENST00000618111 748 ntBASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
TRAF3IP1Q8TDR0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
TRAF3IP1Q8TDR0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.59□□□□□ -1.68
TRAF3IP1Q8TDR0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
TRAF3IP1Q8TDR0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms