Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC012254.3-201ENST00000591183 2117 ntBASIC5.56□□□□□ -1.52
NUP43Q8NFH3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC138915.3-201ENST00000562908 1389 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC007159.1-201ENST00000566529 4706 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AL359955.1-201ENST00000455242 3275 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC003973.3-201ENST00000624863 2822 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 OR4A15-201ENST00000314706 1035 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 OR52E6-202ENST00000379946 954 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 RNU6-877P-201ENST00000383868 107 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 RNU6-483P-201ENST00000384088 108 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 RNU6-1103P-201ENST00000384150 107 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 SNORA51.9-201ENST00000384295 124 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 RNU6-809P-201ENST00000384461 107 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 SNORA11B-201ENST00000408175 129 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AMD1P2-201ENST00000412936 992 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 HMGB3P20-201ENST00000417997 600 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AL445928.1-201ENST00000435545 222 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AL663074.2-201ENST00000440621 479 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 RPS7P3-201ENST00000443360 580 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC097463.1-201ENST00000447288 481 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC079448.1-201ENST00000449377 373 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC098847.1-201ENST00000473094 348 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 SUMO2P4-201ENST00000504193 276 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 IMPA1P1-201ENST00000510718 842 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 Y_RNA.693-201ENST00000516641 110 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 RN7SKP35-201ENST00000517210 151 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 HIGD1AP6-201ENST00000521833 279 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 CBX3P5-201ENST00000552017 521 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 HMGN2P47-201ENST00000559378 272 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC116158.1-201ENST00000560231 2129 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 NPM1P42-201ENST00000560329 862 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 MIR4307-201ENST00000582802 84 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC005498.1-201ENST00000592125 465 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC124916.2-201ENST00000604416 224 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AL499605.1-201ENST00000604628 403 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 PART1_1.1-201ENST00000611761 217 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC135507.2-201ENST00000612443 309 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AL021918.2-201ENST00000613415 194 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 MIR3662-201ENST00000637030 95 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 ASNSP1-204ENST00000641977 1664 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 HSPA8P17-201ENST00000427029 1382 ntBASIC5.55□□□□□ -1.52
NUP43Q8NFH3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.55□□□□□ -1.52
NUP43Q8NFH3 AC140479.2-201ENST00000421567 3130 ntBASIC5.54□□□□□ -1.52
NUP43Q8NFH3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP43Q8NFH3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP43Q8NFH3 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
NUP43Q8NFH3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUP43Q8NFH3 AC006378.2-201ENST00000623178 2476 ntBASIC5.54□□□□□ -1.52
NUP43Q8NFH3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.54□□□□□ -1.52
NUP43Q8NFH3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
NUP43Q8NFH3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NUP43Q8NFH3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NUP43Q8NFH3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
NUP43Q8NFH3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NUP43Q8NFH3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
NUP43Q8NFH3 Y_RNA.1-201ENST00000352915 104 ntBASIC5.54□□□□□ -1.52
NUP43Q8NFH3 RNU1-65P-201ENST00000363919 148 ntBASIC5.54□□□□□ -1.52
NUP43Q8NFH3 RNA5SP435-201ENST00000364044 108 ntBASIC5.54□□□□□ -1.52
NUP43Q8NFH3 RN7SKP128-201ENST00000364270 303 ntBASIC5.54□□□□□ -1.52
NUP43Q8NFH3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUP43Q8NFH3 MIR506-201ENST00000384998 124 ntBASIC5.54□□□□□ -1.52
NUP43Q8NFH3 Y_RNA.608-201ENST00000410647 95 ntBASIC5.54□□□□□ -1.52
NUP43Q8NFH3 RPL35AP3-201ENST00000414680 288 ntBASIC5.54□□□□□ -1.52
NUP43Q8NFH3 FABP7P1-201ENST00000424004 391 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms