Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 RN7SKP44-201ENST00000363602 316 ntBASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 RN7SKP103-201ENST00000363848 320 ntBASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 RNU1-89P-201ENST00000384592 164 ntBASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 MIR320B1-201ENST00000390209 79 ntBASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 AL359265.2-201ENST00000434367 631 ntBASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 AC005229.2-201ENST00000456995 399 ntBASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 RN7SL826P-201ENST00000479724 288 ntBASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 AC011037.1-201ENST00000483964 558 ntBASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 RNU6-1308P-201ENST00000516817 103 ntBASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 CBX3P5-201ENST00000552017 521 ntBASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 MIMT1-201ENST00000597105 1050 ntBASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 AC010680.3-201ENST00000604215 520 ntBASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 OR6R2P-201ENST00000609216 300 ntBASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.1□□□□□ -1.75
NUDCD3Q8IVD9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC103591.2-201ENST00000265259 766 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 MIR550A3-201ENST00000390735 95 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 RNU6-244P-201ENST00000391028 104 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 RNA5SP36-201ENST00000410197 133 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC073069.1-201ENST00000428657 441 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC011998.1-201ENST00000433403 117 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 MRPS33P4-201ENST00000434892 317 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AF228730.2-201ENST00000438784 848 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 YWHAQP9-201ENST00000445891 512 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 HMGB1P16-201ENST00000447155 540 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 MTND6P6-201ENST00000478031 263 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 RN7SL205P-201ENST00000490174 284 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 HPRT1P2-201ENST00000505250 544 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 HMGB1P47-201ENST00000511281 589 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC016550.3-201ENST00000515706 767 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC007424.1-203ENST00000554613 687 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 GNRHR2P1-201ENST00000555315 631 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 RPL23AP87-202ENST00000573039 466 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 VN1R84P-201ENST00000593697 235 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 MRPS35P3-201ENST00000603189 709 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC012409.3-201ENST00000611343 981 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC016911.1-201ENST00000613297 452 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC090246.1-201ENST00000616499 426 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AL445363.3-201ENST00000623080 671 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC020763.5-201ENST00000623298 430 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 LINC00216-201ENST00000623548 1126 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC009951.1-201ENST00000623674 2614 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 AC083899.2-201ENST00000423285 1376 ntBASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NUDCD3Q8IVD9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NUDCD3Q8IVD9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
NUDCD3Q8IVD9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.08□□□□□ -1.76
NUDCD3Q8IVD9 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms