Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 BNIP3P41-201ENST00000503774 571 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC006427.1-201ENST00000514359 712 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC116347.2-201ENST00000514912 523 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 AP004247.1-201ENST00000531556 1289 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC009852.2-201ENST00000567898 485 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 MTCO1P40-201ENST00000574371 625 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 RN7SL708P-201ENST00000580952 299 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VRK3Q8IV63 EIF1P6-201ENST00000600054 334 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC092354.1-201ENST00000606057 376 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 U4.5-201ENST00000617137 123 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC092794.2-201ENST00000620933 563 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC138965.3-201ENST00000623875 498 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 OR5AK4P-201ENST00000635912 903 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VRK3Q8IV63 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VRK3Q8IV63 MTND4P23-201ENST00000447723 1363 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
VRK3Q8IV63 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VRK3Q8IV63 AL450345.1-202ENST00000605741 3881 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VRK3Q8IV63 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VRK3Q8IV63 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VRK3Q8IV63 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 RNU4-91P-201ENST00000364778 135 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 OR1L1-202ENST00000373686 1083 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 RPL12P9-201ENST00000412942 488 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC079809.1-201ENST00000415468 276 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC104651.1-201ENST00000427559 735 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 SEPT7P3-201ENST00000455017 621 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC104849.1-201ENST00000462623 405 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 RN7SL189P-201ENST00000468631 289 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC107398.1-201ENST00000486904 505 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 HMGB1P36-201ENST00000487709 576 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 OR4G11P-201ENST00000492842 939 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 AP003392.2-201ENST00000527269 208 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 OR6C7P-201ENST00000547875 934 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC012435.1-202ENST00000568772 240 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 MTCYBP13-201ENST00000578634 1093 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC126915.2-201ENST00000610957 190 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms