Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC026585.1-201ENST00000619582 524 ntBASIC4.84□□□□□ -1.63
PTCHD4Q6ZW05 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.84□□□□□ -1.63
PTCHD4Q6ZW05 AC063976.2-201ENST00000425667 3556 ntBASIC4.84□□□□□ -1.63
PTCHD4Q6ZW05 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.84□□□□□ -1.63
PTCHD4Q6ZW05 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTCHD4Q6ZW05 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.84□□□□□ -1.64
PTCHD4Q6ZW05 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PTCHD4Q6ZW05 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.84□□□□□ -1.64
PTCHD4Q6ZW05 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
PTCHD4Q6ZW05 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.84□□□□□ -1.64
PTCHD4Q6ZW05 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC023421.1-201ENST00000590535 1785 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 OR13C1P-202ENST00000641378 2919 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 HMGN1P20-201ENST00000411849 300 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC073069.1-201ENST00000428657 441 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 KCTD10P1-201ENST00000434203 625 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 USP9YP28-201ENST00000435142 589 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AL031663.1-201ENST00000437445 219 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 TAF9P1-201ENST00000445421 515 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 TAF9P2-201ENST00000454958 515 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 RPL23AP71-201ENST00000470966 469 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 RN7SL741P-201ENST00000482473 289 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 NCOR1P1-202ENST00000486162 291 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 RPS27P23-201ENST00000487608 251 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 RN7SL649P-201ENST00000496974 275 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC005178.1-201ENST00000508392 440 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC109481.1-201ENST00000509173 282 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 IGLVIV-64-201ENST00000518581 301 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC007115.1-201ENST00000546853 234 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AL121766.1-201ENST00000547436 487 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 NTAN1P1-201ENST00000603150 646 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC064872.1-201ENST00000604823 1072 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC010200.2-201ENST00000605098 235 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC008115.3-201ENST00000614874 549 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC037198.3-201ENST00000616754 526 ntBASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PTCHD4Q6ZW05 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 RNA5SP46-201ENST00000362370 120 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 Y_RNA.311-201ENST00000365068 96 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 RNU6-146P-201ENST00000384602 108 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AL031577.2-201ENST00000404133 280 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms