Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC011487.3-201ENST00000593607 453 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC068870.2-201ENST00000620635 389 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AL359757.1-201ENST00000623176 255 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC097461.1-201ENST00000568928 2821 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC245100.2-201ENST00000454544 1679 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 ELL2P3-201ENST00000457883 1602 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 CDC27P2-201ENST00000425026 1922 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 MTND5P23-201ENST00000430812 1655 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AL645927.1-201ENST00000396783 406 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 RSU1P3-201ENST00000412878 835 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AL365203.2-201ENST00000423444 196 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 CYCSP11-201ENST00000436426 315 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AL353706.1-201ENST00000436728 494 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 ISCA1P2-201ENST00000438679 421 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 PTMAP6-201ENST00000439110 327 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AL138878.2-201ENST00000440581 1241 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC068135.1-201ENST00000446164 246 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC104651.2-201ENST00000447549 528 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC079168.2-201ENST00000453977 416 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC244505.3-201ENST00000454598 187 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 RPS5P7-201ENST00000456664 608 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 MTCYBP37-201ENST00000510642 1133 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 RN7SKP34-201ENST00000516142 244 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC024909.2-201ENST00000553035 286 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC079075.1-201ENST00000559543 878 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC009117.1-201ENST00000563948 554 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC093591.2-201ENST00000565254 3843 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC015912.2-201ENST00000571053 181 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 DPRXP4-201ENST00000578053 568 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC130352.1-201ENST00000602979 661 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AP002906.1-201ENST00000603405 233 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC016877.3-201ENST00000606778 504 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC004492.1-201ENST00000607036 742 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AP003392.5-201ENST00000607857 415 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC024257.5-201ENST00000612739 531 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AC015722.2-201ENST00000622210 551 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 AL442639.1-201ENST00000625030 1899 ntBASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNF549Q6P9A3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 PROS2P-201ENST00000474651 1951 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 MTCO1P7-201ENST00000419523 1542 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC017007.4-201ENST00000503353 1352 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AL031119.1-201ENST00000404707 1879 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 SNORA74A-201ENST00000364089 198 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 RNU6-224P-201ENST00000384055 107 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms