Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.7□□□□□ -1.98
PRKDCP78527 AC073522.1-201ENST00000483312 377 ntBASIC2.7□□□□□ -1.98
PRKDCP78527 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.7□□□□□ -1.98
PRKDCP78527 STMN1P2-201ENST00000508435 439 ntBASIC2.7□□□□□ -1.98
PRKDCP78527 HIGD1AP3-201ENST00000515857 278 ntBASIC2.7□□□□□ -1.98
PRKDCP78527 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.7□□□□□ -1.98
PRKDCP78527 AL359219.2-201ENST00000555184 348 ntBASIC2.7□□□□□ -1.98
PRKDCP78527 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PRKDCP78527 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PRKDCP78527 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
PRKDCP78527 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PRKDCP78527 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PRKDCP78527 OR56B2P-201ENST00000317102 954 ntBASIC2.7□□□□□ -1.98
PRKDCP78527 RNU6-304P-201ENST00000364855 107 ntBASIC2.7□□□□□ -1.98
PRKDCP78527 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.7□□□□□ -1.98
PRKDCP78527 RPL7P48-201ENST00000461513 746 ntBASIC2.7□□□□□ -1.98
PRKDCP78527 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.7□□□□□ -1.98
PRKDCP78527 AC093755.1-201ENST00000512950 1023 ntBASIC2.7□□□□□ -1.98
PRKDCP78527 RNA5SP208-201ENST00000516156 78 ntBASIC2.7□□□□□ -1.98
PRKDCP78527 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.7□□□□□ -1.98
PRKDCP78527 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
PRKDCP78527 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
PRKDCP78527 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
PRKDCP78527 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PRKDCP78527 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC2.7□□□□□ -1.98
PRKDCP78527 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PRKDCP78527 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PRKDCP78527 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.7□□□□□ -1.98
PRKDCP78527 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
PRKDCP78527 SNORA44-201ENST00000384584 132 ntBASIC2.7□□□□□ -1.98
PRKDCP78527 RPL7P24-201ENST00000493052 752 ntBASIC2.7□□□□□ -1.98
PRKDCP78527 AC093732.2-201ENST00000607950 274 ntBASIC2.7□□□□□ -1.98
PRKDCP78527 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
PRKDCP78527 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PRKDCP78527 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.69□□□□□ -1.98
PRKDCP78527 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PRKDCP78527 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
PRKDCP78527 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
PRKDCP78527 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC2.69□□□□□ -1.98
PRKDCP78527 Z99755.1-201ENST00000414048 380 ntBASIC2.69□□□□□ -1.98
PRKDCP78527 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.69□□□□□ -1.98
PRKDCP78527 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.69□□□□□ -1.98
PRKDCP78527 AL590240.3-201ENST00000621416 943 ntBASIC2.69□□□□□ -1.98
PRKDCP78527 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.69□□□□□ -1.98
PRKDCP78527 THAP12P5-201ENST00000405864 2275 ntBASIC2.69□□□□□ -1.98
PRKDCP78527 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PRKDCP78527 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PRKDCP78527 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PRKDCP78527 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC2.69□□□□□ -1.98
PRKDCP78527 AC083843.3-201ENST00000623679 2186 ntBASIC2.69□□□□□ -1.98
PRKDCP78527 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC2.69□□□□□ -1.98
PRKDCP78527 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
PRKDCP78527 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PRKDCP78527 PGBD4P8-201ENST00000412993 562 ntBASIC2.69□□□□□ -1.98
PRKDCP78527 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC2.69□□□□□ -1.98
PRKDCP78527 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.69□□□□□ -1.98
PRKDCP78527 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.69□□□□□ -1.98
PRKDCP78527 RNA5SP249-201ENST00000516127 99 ntBASIC2.69□□□□□ -1.98
PRKDCP78527 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC2.69□□□□□ -1.98
PRKDCP78527 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.69□□□□□ -1.98
PRKDCP78527 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PRKDCP78527 ZNF90P1-201ENST00000480493 1951 ntBASIC2.69□□□□□ -1.98
PRKDCP78527 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PRKDCP78527 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC2.69□□□□□ -1.98
PRKDCP78527 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC2.69□□□□□ -1.98
PRKDCP78527 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC2.69□□□□□ -1.98
PRKDCP78527 RN7SKP97-201ENST00000410966 333 ntBASIC2.69□□□□□ -1.98
PRKDCP78527 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.69□□□□□ -1.98
PRKDCP78527 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.69□□□□□ -1.98
PRKDCP78527 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.69□□□□□ -1.98
PRKDCP78527 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PRKDCP78527 AC009159.1-201ENST00000618386 642 ntBASIC2.69□□□□□ -1.98
PRKDCP78527 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC2.69□□□□□ -1.98
PRKDCP78527 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PRKDCP78527 LINC01109-201ENST00000603837 3081 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
PRKDCP78527 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRKDCP78527 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC2.68□□□□□ -1.98
PRKDCP78527 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
PRKDCP78527 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRKDCP78527 HMGN2P27-201ENST00000427352 270 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 FDX1P2-201ENST00000450769 375 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 SNORA70.17-201ENST00000516449 133 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 AC103783.1-201ENST00000520506 373 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC2.68□□□□□ -1.98
PRKDCP78527 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PRKDCP78527 AL512310.1-201ENST00000548639 172 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 RPL23AP87-202ENST00000573039 466 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PRKDCP78527 AC000374.1-201ENST00000434698 1745 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PRKDCP78527 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PRKDCP78527 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PRKDCP78527 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRKDCP78527 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRKDCP78527 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PRKDCP78527 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PRKDCP78527 SNORA54-201ENST00000384281 123 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 RNU1-44P-201ENST00000384453 163 ntBASIC2.68□□□□□ -1.98
PRKDCP78527 EIF4A1P1-201ENST00000420241 934 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms