Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
VSX2P58304 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
VSX2P58304 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.98□□□□□ -1.77
VSX2P58304 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.98□□□□□ -1.77
VSX2P58304 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.98□□□□□ -1.77
VSX2P58304 AC007224.1-201ENST00000564410 144 ntBASIC3.98□□□□□ -1.77
VSX2P58304 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX2P58304 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX2P58304 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX2P58304 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.98□□□□□ -1.77
VSX2P58304 AL020997.2-201ENST00000602607 184 ntBASIC3.98□□□□□ -1.77
VSX2P58304 AL139286.1-201ENST00000604465 483 ntBASIC3.98□□□□□ -1.77
VSX2P58304 RMST_5.1-201ENST00000618704 126 ntBASIC3.98□□□□□ -1.77
VSX2P58304 AC074276.2-201ENST00000619891 348 ntBASIC3.98□□□□□ -1.77
VSX2P58304 MIR492-201ENST00000638676 116 ntBASIC3.98□□□□□ -1.77
VSX2P58304 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
VSX2P58304 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.98□□□□□ -1.77
VSX2P58304 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.98□□□□□ -1.77
VSX2P58304 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.98□□□□□ -1.77
VSX2P58304 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
VSX2P58304 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
VSX2P58304 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
VSX2P58304 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.98□□□□□ -1.77
VSX2P58304 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.98□□□□□ -1.77
VSX2P58304 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VSX2P58304 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
VSX2P58304 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VSX2P58304 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VSX2P58304 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
VSX2P58304 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VSX2P58304 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VSX2P58304 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VSX2P58304 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VSX2P58304 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VSX2P58304 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VSX2P58304 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.97□□□□□ -1.77
VSX2P58304 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
VSX2P58304 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VSX2P58304 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
VSX2P58304 RNA5SP502-201ENST00000362694 119 ntBASIC3.97□□□□□ -1.77
VSX2P58304 RNU6-670P-201ENST00000364312 104 ntBASIC3.97□□□□□ -1.77
VSX2P58304 RNU4-7P-201ENST00000364758 141 ntBASIC3.97□□□□□ -1.77
VSX2P58304 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VSX2P58304 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
VSX2P58304 RNU11-4P-201ENST00000391149 133 ntBASIC3.97□□□□□ -1.77
VSX2P58304 AL136131.1-201ENST00000406079 803 ntBASIC3.97□□□□□ -1.77
VSX2P58304 AL603766.1-201ENST00000407763 664 ntBASIC3.97□□□□□ -1.77
VSX2P58304 MIR1193-201ENST00000408109 78 ntBASIC3.97□□□□□ -1.77
VSX2P58304 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.97□□□□□ -1.77
VSX2P58304 RNA5SP317-201ENST00000410176 116 ntBASIC3.97□□□□□ -1.77
VSX2P58304 RNA5SP311-201ENST00000411290 116 ntBASIC3.97□□□□□ -1.77
VSX2P58304 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.97□□□□□ -1.77
VSX2P58304 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.97□□□□□ -1.77
VSX2P58304 AC093084.1-201ENST00000424233 687 ntBASIC3.97□□□□□ -1.77
VSX2P58304 MRPL50P1-201ENST00000431951 384 ntBASIC3.97□□□□□ -1.77
VSX2P58304 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.97□□□□□ -1.77
VSX2P58304 CCRL1P1-201ENST00000449542 1053 ntBASIC3.97□□□□□ -1.77
VSX2P58304 EIF4A1P11-201ENST00000451239 222 ntBASIC3.97□□□□□ -1.77
VSX2P58304 RNA5SP246-201ENST00000458909 119 ntBASIC3.97□□□□□ -1.77
VSX2P58304 AC079804.1-201ENST00000461922 436 ntBASIC3.97□□□□□ -1.77
VSX2P58304 RN7SL604P-201ENST00000492589 296 ntBASIC3.97□□□□□ -1.77
VSX2P58304 BNIP3P41-201ENST00000503774 571 ntBASIC3.97□□□□□ -1.77
VSX2P58304 HPRT1P2-201ENST00000505250 544 ntBASIC3.97□□□□□ -1.77
VSX2P58304 RNA5SP315-201ENST00000516340 116 ntBASIC3.97□□□□□ -1.77
VSX2P58304 RNA5SP312-201ENST00000517068 116 ntBASIC3.97□□□□□ -1.77
VSX2P58304 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.97□□□□□ -1.77
VSX2P58304 IFITM8P-201ENST00000522529 394 ntBASIC3.97□□□□□ -1.77
VSX2P58304 DEFB109D-201ENST00000529497 240 ntBASIC3.97□□□□□ -1.77
VSX2P58304 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VSX2P58304 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.97□□□□□ -1.77
VSX2P58304 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.97□□□□□ -1.77
VSX2P58304 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.97□□□□□ -1.77
VSX2P58304 AC063950.1-201ENST00000552036 308 ntBASIC3.97□□□□□ -1.77
VSX2P58304 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.97□□□□□ -1.77
VSX2P58304 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.97□□□□□ -1.77
VSX2P58304 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.97□□□□□ -1.77
VSX2P58304 BNIP3P5-201ENST00000562290 498 ntBASIC3.97□□□□□ -1.77
VSX2P58304 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VSX2P58304 AC027281.1-201ENST00000574178 758 ntBASIC3.97□□□□□ -1.77
VSX2P58304 MIR3160-1-201ENST00000577972 85 ntBASIC3.97□□□□□ -1.77
VSX2P58304 OR1AB1P-201ENST00000585564 761 ntBASIC3.97□□□□□ -1.77
VSX2P58304 AC068790.5-201ENST00000602741 355 ntBASIC3.97□□□□□ -1.77
VSX2P58304 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VSX2P58304 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.97□□□□□ -1.77
VSX2P58304 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.97□□□□□ -1.77
VSX2P58304 ZYXP1-201ENST00000617638 118 ntBASIC3.97□□□□□ -1.77
VSX2P58304 AL391597.1-201ENST00000618707 694 ntBASIC3.97□□□□□ -1.77
VSX2P58304 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.97□□□□□ -1.77
VSX2P58304 AC010608.2-201ENST00000624830 470 ntBASIC3.97□□□□□ -1.77
VSX2P58304 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.97□□□□□ -1.77
VSX2P58304 AL451142.2-201ENST00000429076 2090 ntBASIC3.97□□□□□ -1.77
VSX2P58304 HSPD1P11-201ENST00000508643 1702 ntBASIC3.97□□□□□ -1.77
VSX2P58304 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.97□□□□□ -1.77
VSX2P58304 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
VSX2P58304 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
VSX2P58304 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
VSX2P58304 OR11H5P-202ENST00000641612 1325 ntBASIC3.96□□□□□ -1.77
VSX2P58304 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VSX2P58304 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VSX2P58304 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms