Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AL020997.2-201ENST00000602607 184 ntBASIC5.17□□□□□ -1.58
RIPK4P57078 AL109618.2-201ENST00000605527 211 ntBASIC5.17□□□□□ -1.58
RIPK4P57078 AP000255.1-201ENST00000610276 676 ntBASIC5.17□□□□□ -1.58
RIPK4P57078 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.17□□□□□ -1.58
RIPK4P57078 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.17□□□□□ -1.58
RIPK4P57078 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RIPK4P57078 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RIPK4P57078 CASC19-255ENST00000641733 1385 ntBASIC5.16□□□□□ -1.58
RIPK4P57078 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
RIPK4P57078 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.16□□□□□ -1.58
RIPK4P57078 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.16□□□□□ -1.58
RIPK4P57078 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIPK4P57078 RNU6-167P-201ENST00000384292 106 ntBASIC5.16□□□□□ -1.58
RIPK4P57078 RPL7AP73-201ENST00000413490 353 ntBASIC5.16□□□□□ -1.58
RIPK4P57078 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.16□□□□□ -1.58
RIPK4P57078 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RIPK4P57078 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.16□□□□□ -1.58
RIPK4P57078 OR9M1P-201ENST00000459641 921 ntBASIC5.16□□□□□ -1.58
RIPK4P57078 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
RIPK4P57078 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.16□□□□□ -1.58
RIPK4P57078 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.16□□□□□ -1.58
RIPK4P57078 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.16□□□□□ -1.58
RIPK4P57078 AC005255.1-201ENST00000593748 216 ntBASIC5.16□□□□□ -1.58
RIPK4P57078 AC068020.1-201ENST00000594215 661 ntBASIC5.16□□□□□ -1.58
RIPK4P57078 AC078899.5-201ENST00000612475 178 ntBASIC5.16□□□□□ -1.58
RIPK4P57078 FP236240.3-201ENST00000623061 327 ntBASIC5.16□□□□□ -1.58
RIPK4P57078 AL359715.5-201ENST00000623431 443 ntBASIC5.16□□□□□ -1.58
RIPK4P57078 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIPK4P57078 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIPK4P57078 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
RIPK4P57078 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RIPK4P57078 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RIPK4P57078 CDC27P2-201ENST00000425026 1922 ntBASIC5.15□□□□□ -1.58
RIPK4P57078 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
RIPK4P57078 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
RIPK4P57078 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
RIPK4P57078 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RIPK4P57078 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
RIPK4P57078 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RIPK4P57078 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RIPK4P57078 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RIPK4P57078 RPL32P23-201ENST00000397237 405 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.15□□□□□ -1.59
RIPK4P57078 RNU2-22P-201ENST00000411266 212 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 CBX1P3-201ENST00000413296 527 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 RPL17P36-201ENST00000420302 549 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 AL391219.1-201ENST00000422570 483 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 RPL7P2-201ENST00000427639 268 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 ELOCP8-201ENST00000439309 332 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 HMGB1P37-201ENST00000439613 609 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 ELOCP15-201ENST00000442090 332 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RIPK4P57078 RANP8-201ENST00000444720 713 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.15□□□□□ -1.59
RIPK4P57078 HMGB3P22-202ENST00000451823 572 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.15□□□□□ -1.59
RIPK4P57078 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.15□□□□□ -1.59
RIPK4P57078 GAPDHP36-201ENST00000480688 918 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.15□□□□□ -1.59
RIPK4P57078 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.15□□□□□ -1.59
RIPK4P57078 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.15□□□□□ -1.59
RIPK4P57078 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RIPK4P57078 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RIPK4P57078 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.15□□□□□ -1.59
RIPK4P57078 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.15□□□□□ -1.59
RIPK4P57078 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.15□□□□□ -1.59
RIPK4P57078 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.15□□□□□ -1.59
RIPK4P57078 GNRHR2P1-201ENST00000555315 631 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 AL354798.1-201ENST00000622505 329 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 AP003400.2-201ENST00000624036 666 ntBASIC5.15□□□□□ -1.59
RIPK4P57078 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
RIPK4P57078 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RIPK4P57078 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.15□□□□□ -1.59
RIPK4P57078 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RIPK4P57078 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.14□□□□□ -1.59
RIPK4P57078 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RIPK4P57078 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RIPK4P57078 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.14□□□□□ -1.59
RIPK4P57078 RNU1-64P-201ENST00000365443 163 ntBASIC5.14□□□□□ -1.59
RIPK4P57078 AC025750.1-201ENST00000399891 379 ntBASIC5.14□□□□□ -1.59
RIPK4P57078 KCTD10P1-201ENST00000434203 625 ntBASIC5.14□□□□□ -1.59
RIPK4P57078 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.14□□□□□ -1.59
RIPK4P57078 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.14□□□□□ -1.59
RIPK4P57078 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.14□□□□□ -1.59
RIPK4P57078 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.14□□□□□ -1.59
RIPK4P57078 AC135999.1-201ENST00000478962 479 ntBASIC5.14□□□□□ -1.59
RIPK4P57078 RPL7P24-201ENST00000493052 752 ntBASIC5.14□□□□□ -1.59
RIPK4P57078 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.14□□□□□ -1.59
RIPK4P57078 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.14□□□□□ -1.59
RIPK4P57078 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.14□□□□□ -1.59
RIPK4P57078 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.14□□□□□ -1.59
RIPK4P57078 HSPE1P5-201ENST00000561489 272 ntBASIC5.14□□□□□ -1.59
RIPK4P57078 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.14□□□□□ -1.59
RIPK4P57078 AL137072.1-201ENST00000603444 466 ntBASIC5.14□□□□□ -1.59
RIPK4P57078 AC022960.2-201ENST00000616300 666 ntBASIC5.14□□□□□ -1.59
RIPK4P57078 AC099669.2-201ENST00000616549 437 ntBASIC5.14□□□□□ -1.59
RIPK4P57078 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
RIPK4P57078 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.14□□□□□ -1.59
RIPK4P57078 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms