Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH4P55283 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDH4P55283 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH4P55283 KPNA2P2-201ENST00000419546 1489 ntBASIC4.31□□□□□ -1.72
CDH4P55283 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CDH4P55283 AL359715.4-201ENST00000606629 1436 ntBASIC4.31□□□□□ -1.72
CDH4P55283 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDH4P55283 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDH4P55283 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH4P55283 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CDH4P55283 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH4P55283 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH4P55283 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CDH4P55283 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CDH4P55283 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH4P55283 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDH4P55283 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.31□□□□□ -1.72
CDH4P55283 RPS27AP11-201ENST00000402798 447 ntBASIC4.31□□□□□ -1.72
CDH4P55283 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH4P55283 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH4P55283 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.31□□□□□ -1.72
CDH4P55283 TPTE2P1-204ENST00000435256 593 ntBASIC4.31□□□□□ -1.72
CDH4P55283 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH4P55283 MTCYBP12-201ENST00000440559 1134 ntBASIC4.31□□□□□ -1.72
CDH4P55283 OR52A4P-203ENST00000498233 1014 ntBASIC4.31□□□□□ -1.72
CDH4P55283 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH4P55283 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH4P55283 VTA1P2-201ENST00000520205 911 ntBASIC4.31□□□□□ -1.72
CDH4P55283 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH4P55283 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.31□□□□□ -1.72
CDH4P55283 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH4P55283 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH4P55283 AC027176.2-201ENST00000559166 746 ntBASIC4.31□□□□□ -1.72
CDH4P55283 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH4P55283 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH4P55283 MIR6798-201ENST00000612887 67 ntBASIC4.31□□□□□ -1.72
CDH4P55283 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDH4P55283 MIR492-201ENST00000638676 116 ntBASIC4.31□□□□□ -1.72
CDH4P55283 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CDH4P55283 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDH4P55283 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH4P55283 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH4P55283 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH4P55283 AL445437.1-201ENST00000623157 3087 ntBASIC4.3□□□□□ -1.72
CDH4P55283 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CDH4P55283 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH4P55283 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH4P55283 RNA5SP502-201ENST00000362694 119 ntBASIC4.3□□□□□ -1.72
CDH4P55283 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH4P55283 RNU6-31P-201ENST00000384388 108 ntBASIC4.3□□□□□ -1.72
CDH4P55283 AC136624.1-201ENST00000400791 413 ntBASIC4.3□□□□□ -1.72
CDH4P55283 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.3□□□□□ -1.72
CDH4P55283 RN7SKP33-201ENST00000410942 340 ntBASIC4.3□□□□□ -1.72
CDH4P55283 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH4P55283 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH4P55283 DPY19L1P2-201ENST00000426647 915 ntBASIC4.3□□□□□ -1.72
CDH4P55283 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH4P55283 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH4P55283 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH4P55283 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH4P55283 AC079804.1-201ENST00000461922 436 ntBASIC4.3□□□□□ -1.72
CDH4P55283 AF213884.1-201ENST00000488102 463 ntBASIC4.3□□□□□ -1.72
CDH4P55283 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH4P55283 STMN1P2-201ENST00000508435 439 ntBASIC4.3□□□□□ -1.72
CDH4P55283 PRELID3BP5-201ENST00000508612 460 ntBASIC4.3□□□□□ -1.72
CDH4P55283 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH4P55283 FABP5P6-201ENST00000510588 409 ntBASIC4.3□□□□□ -1.72
CDH4P55283 VWA8P1-201ENST00000510889 176 ntBASIC4.3□□□□□ -1.72
CDH4P55283 RNU6-491P-201ENST00000516099 110 ntBASIC4.3□□□□□ -1.72
CDH4P55283 AC008083.2-201ENST00000546707 476 ntBASIC4.3□□□□□ -1.72
CDH4P55283 AC074029.2-201ENST00000551045 634 ntBASIC4.3□□□□□ -1.72
CDH4P55283 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH4P55283 AC110743.1-201ENST00000584870 478 ntBASIC4.3□□□□□ -1.72
CDH4P55283 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH4P55283 AP004372.1-201ENST00000604842 844 ntBASIC4.3□□□□□ -1.72
CDH4P55283 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH4P55283 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH4P55283 AC090506.2-201ENST00000624521 419 ntBASIC4.3□□□□□ -1.72
CDH4P55283 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH4P55283 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH4P55283 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CDH4P55283 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CDH4P55283 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CDH4P55283 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CDH4P55283 AC007342.9-201ENST00000623877 1385 ntBASIC4.29□□□□□ -1.72
CDH4P55283 AC092162.3-201ENST00000624511 1624 ntBASIC4.29□□□□□ -1.72
CDH4P55283 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH4P55283 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH4P55283 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CDH4P55283 AL121657.1-201ENST00000327215 531 ntBASIC4.29□□□□□ -1.72
CDH4P55283 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH4P55283 AL022722.2-201ENST00000402519 180 ntBASIC4.29□□□□□ -1.72
CDH4P55283 AL603766.1-201ENST00000407763 664 ntBASIC4.29□□□□□ -1.72
CDH4P55283 AC108032.1-201ENST00000416706 207 ntBASIC4.29□□□□□ -1.72
CDH4P55283 TRGV6-201ENST00000417928 299 ntBASIC4.29□□□□□ -1.72
CDH4P55283 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH4P55283 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH4P55283 MRPL50P1-201ENST00000431951 384 ntBASIC4.29□□□□□ -1.72
CDH4P55283 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH4P55283 AL606490.7-201ENST00000433136 191 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms