Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RNU6-575P-201ENST00000411326 105 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NR1H2P55055 AC092648.1-201ENST00000425870 423 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 AC234779.1-201ENST00000425910 285 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.82□□□□□ -1.64
NR1H2P55055 USP9YP24-201ENST00000434374 697 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.82□□□□□ -1.64
NR1H2P55055 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.82□□□□□ -1.64
NR1H2P55055 USP9YP17-201ENST00000444617 696 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NR1H2P55055 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.82□□□□□ -1.64
NR1H2P55055 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
NR1H2P55055 AL672138.1-201ENST00000450604 1015 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.82□□□□□ -1.64
NR1H2P55055 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.82□□□□□ -1.64
NR1H2P55055 AC091685.2-201ENST00000454924 864 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 RPL7AP28-201ENST00000464513 571 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.82□□□□□ -1.64
NR1H2P55055 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.82□□□□□ -1.64
NR1H2P55055 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.82□□□□□ -1.64
NR1H2P55055 AC024558.1-201ENST00000505008 528 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 SNX5P1-201ENST00000505757 1041 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.82□□□□□ -1.64
NR1H2P55055 KRT19P6-201ENST00000510983 209 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NR1H2P55055 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.82□□□□□ -1.64
NR1H2P55055 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.82□□□□□ -1.64
NR1H2P55055 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.82□□□□□ -1.64
NR1H2P55055 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.82□□□□□ -1.64
NR1H2P55055 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NR1H2P55055 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.82□□□□□ -1.64
NR1H2P55055 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.82□□□□□ -1.64
NR1H2P55055 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
NR1H2P55055 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.82□□□□□ -1.64
NR1H2P55055 RN7SL356P-201ENST00000582228 248 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.82□□□□□ -1.64
NR1H2P55055 AC098935.2-201ENST00000604222 466 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.82□□□□□ -1.64
NR1H2P55055 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.82□□□□□ -1.64
NR1H2P55055 AC108359.1-201ENST00000616451 1211 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 AC010975.3-201ENST00000618727 978 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.82□□□□□ -1.64
NR1H2P55055 AC006963.1-201ENST00000624003 1052 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 MFSD8-245ENST00000641743 948 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NR1H2P55055 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NR1H2P55055 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NR1H2P55055 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.82□□□□□ -1.64
NR1H2P55055 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NR1H2P55055 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NR1H2P55055 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NR1H2P55055 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NR1H2P55055 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.82□□□□□ -1.64
NR1H2P55055 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NR1H2P55055 CASC19-206ENST00000641028 1430 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NR1H2P55055 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NR1H2P55055 AC092435.4-201ENST00000623012 4159 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NR1H2P55055 MTND4P8-201ENST00000514997 1362 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NR1H2P55055 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NR1H2P55055 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.81□□□□□ -1.64
NR1H2P55055 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NR1H2P55055 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.81□□□□□ -1.64
NR1H2P55055 RNA5SP443-201ENST00000363083 132 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NR1H2P55055 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NR1H2P55055 DSTNP4-201ENST00000399472 474 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 U3.32-201ENST00000408116 212 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.81□□□□□ -1.64
NR1H2P55055 SSR1P2-201ENST00000415208 787 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.81□□□□□ -1.64
NR1H2P55055 TPTE2P3-201ENST00000441562 1189 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 RPL7AP61-201ENST00000443410 636 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 ELOCP13-201ENST00000443934 329 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.81□□□□□ -1.64
NR1H2P55055 AC105399.1-202ENST00000447303 205 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 RPL7P59-201ENST00000447700 943 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NR1H2P55055 AL645937.3-201ENST00000453647 936 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 AC092155.2-201ENST00000454675 477 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.81□□□□□ -1.64
NR1H2P55055 RPS18P6-201ENST00000476880 458 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 VPS26AP1-201ENST00000483197 979 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 RPS21P4-201ENST00000487122 248 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 AC004453.1-201ENST00000487895 408 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 DEFB109F-201ENST00000491870 277 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 AC005412.2-201ENST00000492004 341 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 AC072052.1-201ENST00000496556 306 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 AC098862.1-201ENST00000504991 413 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.81□□□□□ -1.64
NR1H2P55055 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.81□□□□□ -1.64
NR1H2P55055 RNU6-202P-201ENST00000515998 96 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 Y_RNA.717-201ENST00000517106 92 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.81□□□□□ -1.64
NR1H2P55055 AC124068.1-201ENST00000563131 678 ntBASIC4.81□□□□□ -1.64
NR1H2P55055 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.81□□□□□ -1.64
NR1H2P55055 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.81□□□□□ -1.64
NR1H2P55055 AC067852.4-201ENST00000590314 478 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms