Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC009452.1-201ENST00000640823 606 ntBASIC5.48□□□□□ -1.53
TM4SF4P48230 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM4SF4P48230 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.48□□□□□ -1.53
TM4SF4P48230 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TM4SF4P48230 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM4SF4P48230 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TM4SF4P48230 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM4SF4P48230 SGO1P1-201ENST00000603525 1447 ntBASIC5.48□□□□□ -1.53
TM4SF4P48230 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
TM4SF4P48230 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM4SF4P48230 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.48□□□□□ -1.53
TM4SF4P48230 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM4SF4P48230 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TM4SF4P48230 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TM4SF4P48230 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM4SF4P48230 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TM4SF4P48230 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.47□□□□□ -1.53
TM4SF4P48230 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TM4SF4P48230 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.47□□□□□ -1.53
TM4SF4P48230 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM4SF4P48230 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM4SF4P48230 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TM4SF4P48230 RNU1-87P-201ENST00000363727 170 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TM4SF4P48230 RNU6-636P-201ENST00000384598 107 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 MIR16-1-201ENST00000385271 89 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 VDAC2P1-201ENST00000399358 958 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 RNA5SP317-201ENST00000410176 116 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 RNA5SP311-201ENST00000411290 116 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.47□□□□□ -1.53
TM4SF4P48230 TMBIM7P-201ENST00000418074 855 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 C1DP1-201ENST00000426049 402 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.47□□□□□ -1.53
TM4SF4P48230 HSFY6P-201ENST00000445573 403 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 H2AFZP5-201ENST00000446960 382 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 AL589880.1-201ENST00000448271 287 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 EIF4A1P11-201ENST00000451239 222 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 AC233982.1-201ENST00000451247 436 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.47□□□□□ -1.53
TM4SF4P48230 RPS6P2-201ENST00000454208 705 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TM4SF4P48230 RN7SL558P-201ENST00000497468 299 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 RNU6-416P-201ENST00000516265 103 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 RNA5SP315-201ENST00000516340 116 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 RNA5SP312-201ENST00000517068 116 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.47□□□□□ -1.53
TM4SF4P48230 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.47□□□□□ -1.53
TM4SF4P48230 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
TM4SF4P48230 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.47□□□□□ -1.53
TM4SF4P48230 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.47□□□□□ -1.53
TM4SF4P48230 AL390334.1-201ENST00000556395 450 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.47□□□□□ -1.53
TM4SF4P48230 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.47□□□□□ -1.53
TM4SF4P48230 NF1P5-201ENST00000588287 448 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 AC006116.5-201ENST00000591936 559 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.47□□□□□ -1.53
TM4SF4P48230 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.47□□□□□ -1.53
TM4SF4P48230 IPO5P1-202ENST00000600039 287 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 AC234772.3-201ENST00000602277 528 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 AC091488.1-201ENST00000604239 660 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 AC010200.2-201ENST00000605098 235 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.47□□□□□ -1.53
TM4SF4P48230 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.47□□□□□ -1.53
TM4SF4P48230 AP001153.1-201ENST00000641024 338 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TM4SF4P48230 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.47□□□□□ -1.53
TM4SF4P48230 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.47□□□□□ -1.53
TM4SF4P48230 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TM4SF4P48230 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM4SF4P48230 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.47□□□□□ -1.53
TM4SF4P48230 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TM4SF4P48230 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.47□□□□□ -1.53
TM4SF4P48230 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TM4SF4P48230 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM4SF4P48230 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM4SF4P48230 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM4SF4P48230 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
TM4SF4P48230 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TM4SF4P48230 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TM4SF4P48230 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.46□□□□□ -1.53
TM4SF4P48230 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TM4SF4P48230 AC005261.4-201ENST00000600047 1385 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 AC025263.3-201ENST00000622965 1396 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.46□□□□□ -1.54
TM4SF4P48230 AC063976.2-201ENST00000425667 3556 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 SNORA73.1-201ENST00000363107 205 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
TM4SF4P48230 RNU1-82P-201ENST00000390851 165 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 AL136310.1-201ENST00000404926 654 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 SNORA11F-201ENST00000408237 128 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 RNU6-272P-201ENST00000411028 104 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.46□□□□□ -1.54
TM4SF4P48230 SSR1P2-201ENST00000415208 787 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.46□□□□□ -1.54
TM4SF4P48230 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TM4SF4P48230 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TM4SF4P48230 AL590609.2-201ENST00000421430 368 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 RAC1P8-201ENST00000427086 527 ntBASIC5.46□□□□□ -1.54
TM4SF4P48230 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms