Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDX1P47902 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CDX1P47902 MIR195-201ENST00000385194 87 ntBASIC4.04□□□□□ -1.76
CDX1P47902 TMSB4XP8-201ENST00000402089 135 ntBASIC4.04□□□□□ -1.76
CDX1P47902 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.04□□□□□ -1.76
CDX1P47902 TMSB4XP6-201ENST00000415187 135 ntBASIC4.04□□□□□ -1.76
CDX1P47902 NUP35P2-201ENST00000416748 943 ntBASIC4.04□□□□□ -1.76
CDX1P47902 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.04□□□□□ -1.76
CDX1P47902 MTND4P3-201ENST00000417829 541 ntBASIC4.04□□□□□ -1.76
CDX1P47902 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.04□□□□□ -1.76
CDX1P47902 AC093162.1-201ENST00000419682 124 ntBASIC4.04□□□□□ -1.76
CDX1P47902 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.04□□□□□ -1.76
CDX1P47902 AC004448.2-201ENST00000422360 586 ntBASIC4.04□□□□□ -1.76
CDX1P47902 AC013410.2-201ENST00000422627 201 ntBASIC4.04□□□□□ -1.76
CDX1P47902 TMSB4XP1-201ENST00000424567 135 ntBASIC4.04□□□□□ -1.76
CDX1P47902 AL513175.1-201ENST00000431492 780 ntBASIC4.04□□□□□ -1.76
CDX1P47902 PTGES3P1-201ENST00000439531 483 ntBASIC4.04□□□□□ -1.76
CDX1P47902 RPS26P2-201ENST00000440331 348 ntBASIC4.04□□□□□ -1.76
CDX1P47902 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDX1P47902 KNOP1P3-201ENST00000446933 426 ntBASIC4.04□□□□□ -1.76
CDX1P47902 RPS27AP15-201ENST00000447672 466 ntBASIC4.04□□□□□ -1.76
CDX1P47902 snoU13.7-201ENST00000459220 104 ntBASIC4.04□□□□□ -1.76
CDX1P47902 snoU109.3-201ENST00000459477 145 ntBASIC4.04□□□□□ -1.76
CDX1P47902 RPL6P9-201ENST00000466502 859 ntBASIC4.04□□□□□ -1.76
CDX1P47902 RN7SL189P-201ENST00000468631 289 ntBASIC4.04□□□□□ -1.76
CDX1P47902 RPL32P9-201ENST00000487963 407 ntBASIC4.04□□□□□ -1.76
CDX1P47902 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.04□□□□□ -1.76
CDX1P47902 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDX1P47902 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.04□□□□□ -1.76
CDX1P47902 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.04□□□□□ -1.76
CDX1P47902 HPRT1P1-201ENST00000509498 657 ntBASIC4.04□□□□□ -1.76
CDX1P47902 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.04□□□□□ -1.76
CDX1P47902 AC138701.1-201ENST00000524329 714 ntBASIC4.04□□□□□ -1.76
CDX1P47902 PTP4A1P6-201ENST00000531034 478 ntBASIC4.04□□□□□ -1.76
CDX1P47902 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.04□□□□□ -1.76
CDX1P47902 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.04□□□□□ -1.76
CDX1P47902 AC044913.1-201ENST00000557200 430 ntBASIC4.04□□□□□ -1.76
CDX1P47902 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDX1P47902 RN7SL708P-201ENST00000580952 299 ntBASIC4.04□□□□□ -1.76
CDX1P47902 AC008814.1-201ENST00000603797 406 ntBASIC4.04□□□□□ -1.76
CDX1P47902 AL390816.3-201ENST00000604527 1066 ntBASIC4.04□□□□□ -1.76
CDX1P47902 AL583856.2-201ENST00000606298 543 ntBASIC4.04□□□□□ -1.76
CDX1P47902 AP000238.1-201ENST00000608759 426 ntBASIC4.04□□□□□ -1.76
CDX1P47902 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.04□□□□□ -1.76
CDX1P47902 AL121873.1-201ENST00000616013 524 ntBASIC4.04□□□□□ -1.76
CDX1P47902 AL356121.2-201ENST00000624715 780 ntBASIC4.04□□□□□ -1.76
CDX1P47902 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.04□□□□□ -1.76
CDX1P47902 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDX1P47902 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.04□□□□□ -1.76
CDX1P47902 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.04□□□□□ -1.76
CDX1P47902 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.04□□□□□ -1.76
CDX1P47902 IRF5P1-201ENST00000504852 2164 ntBASIC4.04□□□□□ -1.76
CDX1P47902 AC023421.1-201ENST00000590535 1785 ntBASIC4.04□□□□□ -1.76
CDX1P47902 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.04□□□□□ -1.76
CDX1P47902 AC107081.3-201ENST00000612715 2034 ntBASIC4.04□□□□□ -1.76
CDX1P47902 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.03□□□□□ -1.76
CDX1P47902 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.03□□□□□ -1.76
CDX1P47902 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 AC027290.2-201ENST00000623210 18662 ntBASIC4.03□□□□□ -1.76
CDX1P47902 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.03□□□□□ -1.76
CDX1P47902 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
CDX1P47902 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CDX1P47902 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CDX1P47902 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CDX1P47902 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 RNU1-106P-201ENST00000384382 164 ntBASIC4.03□□□□□ -1.76
CDX1P47902 SNORD96B-201ENST00000386148 79 ntBASIC4.03□□□□□ -1.76
CDX1P47902 DSTNP4-201ENST00000399472 474 ntBASIC4.03□□□□□ -1.76
CDX1P47902 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 PDSS1P1-201ENST00000422953 1114 ntBASIC4.03□□□□□ -1.76
CDX1P47902 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.03□□□□□ -1.76
CDX1P47902 AC008065.1-201ENST00000428525 348 ntBASIC4.03□□□□□ -1.76
CDX1P47902 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.03□□□□□ -1.76
CDX1P47902 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.03□□□□□ -1.76
CDX1P47902 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.03□□□□□ -1.76
CDX1P47902 VN1R54P-201ENST00000435210 1049 ntBASIC4.03□□□□□ -1.76
CDX1P47902 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 Z80107.2-201ENST00000445127 392 ntBASIC4.03□□□□□ -1.76
CDX1P47902 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 AC104306.1-201ENST00000449702 371 ntBASIC4.03□□□□□ -1.76
CDX1P47902 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.03□□□□□ -1.76
CDX1P47902 AL356981.1-201ENST00000454879 684 ntBASIC4.03□□□□□ -1.76
CDX1P47902 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.03□□□□□ -1.76
CDX1P47902 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 SCARNA10-201ENST00000459255 330 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms