Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL15A1P39059 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.65□□□□□ -1.5
COL15A1P39059 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL15A1P39059 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL15A1P39059 AL355852.1-201ENST00000454081 1771 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 ZNF29P-201ENST00000225587 168 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL15A1P39059 RNA5SP151-201ENST00000365632 117 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 MIR137-201ENST00000385223 102 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 RPL17P50-201ENST00000396131 546 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 NRBF2P2-201ENST00000413087 861 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.65□□□□□ -1.51
COL15A1P39059 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL15A1P39059 RPL36AP10-201ENST00000421785 322 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 PNRC2P1-201ENST00000423940 420 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 RPL21P91-201ENST00000429231 479 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL15A1P39059 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.65□□□□□ -1.51
COL15A1P39059 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.65□□□□□ -1.51
COL15A1P39059 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.65□□□□□ -1.51
COL15A1P39059 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.65□□□□□ -1.51
COL15A1P39059 RPL35P6-201ENST00000490024 372 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 PARP4P3-201ENST00000510265 317 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 AC008958.1-201ENST00000511047 682 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 ASNSP4-201ENST00000511103 447 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.65□□□□□ -1.51
COL15A1P39059 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.65□□□□□ -1.51
COL15A1P39059 MTCYBP23-201ENST00000558717 1102 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.65□□□□□ -1.51
COL15A1P39059 AC009712.1-201ENST00000564938 316 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 MIR4429-201ENST00000580105 73 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 AC006130.2-201ENST00000586202 326 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 AC084373.1-201ENST00000603311 235 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 Z82195.1-201ENST00000604558 398 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 AC099676.1-201ENST00000608886 657 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 AL157392.4-201ENST00000609756 345 ntBASIC5.65□□□□□ -1.51
COL15A1P39059 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.65□□□□□ -1.51
COL15A1P39059 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.65□□□□□ -1.51
COL15A1P39059 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL15A1P39059 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL15A1P39059 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.64□□□□□ -1.51
COL15A1P39059 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
COL15A1P39059 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL15A1P39059 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL15A1P39059 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL15A1P39059 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL15A1P39059 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
COL15A1P39059 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.64□□□□□ -1.51
COL15A1P39059 MFSD8-242ENST00000641690 4199 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL15A1P39059 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL15A1P39059 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL15A1P39059 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
COL15A1P39059 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL15A1P39059 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.64□□□□□ -1.51
COL15A1P39059 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
COL15A1P39059 AL583835.1-201ENST00000399570 407 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 EIF4A1P3-201ENST00000411521 244 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 OR51A6P-201ENST00000418680 1004 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.64□□□□□ -1.51
COL15A1P39059 BTF3P10-201ENST00000433415 495 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.64□□□□□ -1.51
COL15A1P39059 ELOCP11-201ENST00000436690 332 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 ARF4P4-201ENST00000439608 520 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 ELOCP16-201ENST00000444494 332 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 Z95327.1-201ENST00000446082 482 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 AC069540.1-201ENST00000446320 988 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 AL031313.1-201ENST00000448435 256 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.64□□□□□ -1.51
COL15A1P39059 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.64□□□□□ -1.51
COL15A1P39059 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL15A1P39059 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL15A1P39059 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.64□□□□□ -1.51
COL15A1P39059 BTG4P1-201ENST00000510421 183 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 SAP18P1-201ENST00000512058 390 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.64□□□□□ -1.51
COL15A1P39059 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.64□□□□□ -1.51
COL15A1P39059 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.64□□□□□ -1.51
COL15A1P39059 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.64□□□□□ -1.51
COL15A1P39059 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.64□□□□□ -1.51
COL15A1P39059 OR8K4P-201ENST00000534608 872 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.64□□□□□ -1.51
COL15A1P39059 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.64□□□□□ -1.51
COL15A1P39059 RPL7P50-201ENST00000600588 727 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.64□□□□□ -1.51
COL15A1P39059 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.64□□□□□ -1.51
COL15A1P39059 MIR8059-201ENST00000620427 81 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 RPL23AP61-201ENST00000623642 466 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL15A1P39059 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.64□□□□□ -1.51
COL15A1P39059 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL15A1P39059 MTCO1P7-201ENST00000419523 1542 ntBASIC5.64□□□□□ -1.51
COL15A1P39059 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL15A1P39059 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL15A1P39059 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL15A1P39059 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms