Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
VAMP1P23763 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VAMP1P23763 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAMP1P23763 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAMP1P23763 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
VAMP1P23763 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.68□□□□□ -1.5
VAMP1P23763 RNU5E-8P-201ENST00000363502 116 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 RNU6-1283P-201ENST00000365314 105 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 RNU11-201ENST00000387069 134 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 RNA5SP18-201ENST00000390935 121 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 RNU6-780P-201ENST00000391030 104 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 AC133644.1-201ENST00000398171 937 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 RNU6-712P-201ENST00000410558 100 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 RN7SKP159-201ENST00000410657 292 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.68□□□□□ -1.5
VAMP1P23763 UQCRBP1-201ENST00000421129 336 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 AC007568.1-201ENST00000422912 471 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 MTCO2P19-201ENST00000427513 598 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 BTF3P10-201ENST00000433415 495 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC5.68□□□□□ -1.5
VAMP1P23763 AC012075.1-201ENST00000436549 580 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 RPL7P54-201ENST00000438336 674 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.68□□□□□ -1.5
VAMP1P23763 AC022080.2-201ENST00000452932 533 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 TUBB4BP2-201ENST00000454125 798 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.68□□□□□ -1.5
VAMP1P23763 AC020893.1-201ENST00000502452 580 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 ARL4AP2-201ENST00000507378 601 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.68□□□□□ -1.5
VAMP1P23763 Y_RNA.693-201ENST00000516641 110 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 RNU4-60P-201ENST00000517239 135 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.68□□□□□ -1.5
VAMP1P23763 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.68□□□□□ -1.5
VAMP1P23763 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.68□□□□□ -1.5
VAMP1P23763 NDUFA3P4-201ENST00000560814 250 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.68□□□□□ -1.5
VAMP1P23763 AC005341.1-201ENST00000571086 708 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 H3F3BP2-201ENST00000583907 357 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.68□□□□□ -1.5
VAMP1P23763 AL360012.1-201ENST00000602813 131 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 AL022394.1-201ENST00000606979 292 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 AC008592.5-201ENST00000607856 547 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.68□□□□□ -1.5
VAMP1P23763 AL603758.1-201ENST00000618654 241 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 AC005790.1-201ENST00000619774 450 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 AC244100.1-202ENST00000621554 382 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.68□□□□□ -1.5
VAMP1P23763 AC211433.3-201ENST00000623770 375 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VAMP1P23763 AC144833.1-201ENST00000567953 4089 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.68□□□□□ -1.5
VAMP1P23763 AC129502.1-201ENST00000623261 1654 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.68□□□□□ -1.5
VAMP1P23763 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAMP1P23763 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VAMP1P23763 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.68□□□□□ -1.5
VAMP1P23763 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VAMP1P23763 LINC01613-201ENST00000561476 2780 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP1P23763 SNORD56.2-201ENST00000363242 71 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 RNA5SP260-201ENST00000363849 111 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 RNU6-1322P-201ENST00000364309 107 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
VAMP1P23763 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP1P23763 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
VAMP1P23763 AL603766.1-201ENST00000407763 664 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 MED15P8-201ENST00000411601 545 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
VAMP1P23763 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.67□□□□□ -1.5
VAMP1P23763 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VAMP1P23763 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.67□□□□□ -1.5
VAMP1P23763 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP1P23763 AL450996.1-201ENST00000445574 1202 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC5.67□□□□□ -1.5
VAMP1P23763 SULT1D1P-201ENST00000458020 882 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 snoU13.3-201ENST00000459441 104 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 RPS18P13-201ENST00000461260 454 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP1P23763 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VAMP1P23763 EIF3LP3-201ENST00000495197 822 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 AC068305.1-201ENST00000497406 726 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.67□□□□□ -1.5
VAMP1P23763 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.67□□□□□ -1.5
VAMP1P23763 RNU6-1281P-201ENST00000516223 105 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 RNU2-10P-201ENST00000516375 211 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 IGLV10-67-201ENST00000519446 325 ntBASIC5.67□□□□□ -1.5
VAMP1P23763 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms