Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.11□□□□□ -1.43
NID1P14543 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NID1P14543 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NID1P14543 RNA5SP382-201ENST00000363355 112 ntBASIC6.11□□□□□ -1.43
NID1P14543 SNORA38B-201ENST00000363524 131 ntBASIC6.11□□□□□ -1.43
NID1P14543 RNU6-1097P-201ENST00000363586 107 ntBASIC6.11□□□□□ -1.43
NID1P14543 RNU6-115P-201ENST00000364310 107 ntBASIC6.11□□□□□ -1.43
NID1P14543 AC092642.1-201ENST00000392417 425 ntBASIC6.11□□□□□ -1.43
NID1P14543 AL359694.1-201ENST00000403247 604 ntBASIC6.11□□□□□ -1.43
NID1P14543 AL359634.1-202ENST00000404721 284 ntBASIC6.11□□□□□ -1.43
NID1P14543 AL590635.1-201ENST00000406314 586 ntBASIC6.11□□□□□ -1.43
NID1P14543 MIR548I3-201ENST00000408378 149 ntBASIC6.11□□□□□ -1.43
NID1P14543 MIR548I1-201ENST00000408810 149 ntBASIC6.11□□□□□ -1.43
NID1P14543 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.11□□□□□ -1.43
NID1P14543 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.11□□□□□ -1.43
NID1P14543 UQCRBP1-201ENST00000421129 336 ntBASIC6.11□□□□□ -1.43
NID1P14543 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.11□□□□□ -1.43
NID1P14543 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.11□□□□□ -1.43
NID1P14543 AC019097.1-201ENST00000424783 735 ntBASIC6.11□□□□□ -1.43
NID1P14543 AHCYP8-201ENST00000425108 209 ntBASIC6.11□□□□□ -1.43
NID1P14543 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.11□□□□□ -1.43
NID1P14543 ERLEC1P1-201ENST00000433806 578 ntBASIC6.11□□□□□ -1.43
NID1P14543 GPR143P-201ENST00000434155 205 ntBASIC6.11□□□□□ -1.43
NID1P14543 AL451136.1-201ENST00000435399 325 ntBASIC6.11□□□□□ -1.43
NID1P14543 AC092809.1-201ENST00000441469 474 ntBASIC6.11□□□□□ -1.43
NID1P14543 RPS24P13-201ENST00000442520 397 ntBASIC6.11□□□□□ -1.43
NID1P14543 AL121578.2-201ENST00000448797 447 ntBASIC6.11□□□□□ -1.43
NID1P14543 GAPDHP14-201ENST00000450472 937 ntBASIC6.11□□□□□ -1.43
NID1P14543 YWHAEP1-201ENST00000453697 763 ntBASIC6.11□□□□□ -1.43
NID1P14543 RN7SL350P-201ENST00000492591 299 ntBASIC6.11□□□□□ -1.43
NID1P14543 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.11□□□□□ -1.43
NID1P14543 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NID1P14543 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC6.11□□□□□ -1.43
NID1P14543 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.11□□□□□ -1.43
NID1P14543 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.11□□□□□ -1.43
NID1P14543 AL390198.2-201ENST00000510553 222 ntBASIC6.11□□□□□ -1.43
NID1P14543 AC093878.1-201ENST00000515630 432 ntBASIC6.11□□□□□ -1.43
NID1P14543 RN7SKP40-201ENST00000517211 242 ntBASIC6.11□□□□□ -1.43
NID1P14543 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.11□□□□□ -1.43
NID1P14543 AP003072.2-201ENST00000527756 676 ntBASIC6.11□□□□□ -1.43
NID1P14543 PTP4A1P6-201ENST00000531034 478 ntBASIC6.11□□□□□ -1.43
NID1P14543 OR5D15P-201ENST00000531671 942 ntBASIC6.11□□□□□ -1.43
NID1P14543 AP002373.2-201ENST00000541631 1060 ntBASIC6.11□□□□□ -1.43
NID1P14543 AL389895.1-201ENST00000554127 252 ntBASIC6.11□□□□□ -1.43
NID1P14543 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NID1P14543 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.11□□□□□ -1.43
NID1P14543 AL157899.1-201ENST00000604110 936 ntBASIC6.11□□□□□ -1.43
NID1P14543 AC011891.2-201ENST00000604949 397 ntBASIC6.11□□□□□ -1.43
NID1P14543 AP001521.1-201ENST00000609150 300 ntBASIC6.11□□□□□ -1.43
NID1P14543 MIR6849-201ENST00000618543 69 ntBASIC6.11□□□□□ -1.43
NID1P14543 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.11□□□□□ -1.43
NID1P14543 AC061999.1-201ENST00000624454 177 ntBASIC6.11□□□□□ -1.43
NID1P14543 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.11□□□□□ -1.43
NID1P14543 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.11□□□□□ -1.43
NID1P14543 AC008957.3-201ENST00000624112 2242 ntBASIC6.11□□□□□ -1.43
NID1P14543 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NID1P14543 AC090337.1-201ENST00000579651 2074 ntBASIC6.11□□□□□ -1.43
NID1P14543 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NID1P14543 AC005332.9-201ENST00000620266 2921 ntBASIC6.11□□□□□ -1.43
NID1P14543 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.11□□□□□ -1.43
NID1P14543 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NID1P14543 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NID1P14543 AC090017.1-201ENST00000548612 1779 ntBASIC6.11□□□□□ -1.43
NID1P14543 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NID1P14543 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NID1P14543 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NID1P14543 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NID1P14543 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NID1P14543 AC112255.1-201ENST00000624070 2493 ntBASIC6.1□□□□□ -1.43
NID1P14543 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NID1P14543 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NID1P14543 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.1□□□□□ -1.43
NID1P14543 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NID1P14543 AL731556.1-201ENST00000394628 3711 ntBASIC6.1□□□□□ -1.43
NID1P14543 CCDC150P1-201ENST00000537123 2215 ntBASIC6.1□□□□□ -1.43
NID1P14543 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
NID1P14543 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.1□□□□□ -1.43
NID1P14543 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.1□□□□□ -1.43
NID1P14543 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.1□□□□□ -1.43
NID1P14543 RNA5SP321-201ENST00000362722 111 ntBASIC6.1□□□□□ -1.43
NID1P14543 Y_RNA.135-201ENST00000363439 95 ntBASIC6.1□□□□□ -1.43
NID1P14543 RNU6-379P-201ENST00000363813 104 ntBASIC6.1□□□□□ -1.43
NID1P14543 RNU6-996P-201ENST00000365438 107 ntBASIC6.1□□□□□ -1.43
NID1P14543 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NID1P14543 AL121834.1-202ENST00000404494 277 ntBASIC6.1□□□□□ -1.43
NID1P14543 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.1□□□□□ -1.43
NID1P14543 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NID1P14543 AL353133.1-201ENST00000407695 401 ntBASIC6.1□□□□□ -1.43
NID1P14543 RNU6-1304P-201ENST00000411374 106 ntBASIC6.1□□□□□ -1.43
NID1P14543 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.1□□□□□ -1.43
NID1P14543 RBMY2KP-201ENST00000418221 992 ntBASIC6.1□□□□□ -1.43
NID1P14543 PTPN2P1-201ENST00000423212 1072 ntBASIC6.1□□□□□ -1.43
NID1P14543 AC000089.1-201ENST00000424559 801 ntBASIC6.1□□□□□ -1.43
NID1P14543 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.1□□□□□ -1.43
NID1P14543 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.1□□□□□ -1.43
NID1P14543 RPS3AP54-201ENST00000435535 734 ntBASIC6.1□□□□□ -1.43
NID1P14543 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NID1P14543 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.1□□□□□ -1.43
NID1P14543 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.1□□□□□ -1.43
NID1P14543 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms