Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC172P0C7W6 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC172P0C7W6 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC172P0C7W6 AC005191.1-201ENST00000603950 358 ntBASIC4.53□□□□□ -1.68
CCDC172P0C7W6 Z82195.1-201ENST00000604558 398 ntBASIC4.53□□□□□ -1.68
CCDC172P0C7W6 AL354950.1-201ENST00000614150 568 ntBASIC4.53□□□□□ -1.68
CCDC172P0C7W6 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC172P0C7W6 RN7SL722P-201ENST00000617780 284 ntBASIC4.53□□□□□ -1.68
CCDC172P0C7W6 RN7SL565P-201ENST00000618246 284 ntBASIC4.53□□□□□ -1.68
CCDC172P0C7W6 C2orf27A-204ENST00000623058 969 ntBASIC4.53□□□□□ -1.68
CCDC172P0C7W6 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC172P0C7W6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC172P0C7W6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CCDC172P0C7W6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC172P0C7W6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC172P0C7W6 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC172P0C7W6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 RNU6-225P-201ENST00000384613 103 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 FTH1P16-201ENST00000435241 552 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 CACYBPP1-201ENST00000438592 684 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 HMGN2P7-201ENST00000456186 273 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AC022336.1-201ENST00000475510 337 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 RPL35P6-201ENST00000490024 372 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 RPL23AP72-201ENST00000492447 435 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AC113398.2-201ENST00000507630 558 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 RNU4-18P-201ENST00000516751 149 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AC087888.1-201ENST00000550884 1254 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AC051619.2-201ENST00000559063 397 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AC012531.5-201ENST00000611375 151 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AC064801.1-201ENST00000612025 407 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AC008013.2-202ENST00000637965 364 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AC090229.1-201ENST00000590983 1609 ntBASIC4.52□□□□□ -1.69
CCDC172P0C7W6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC172P0C7W6 AL132640.2-201ENST00000559968 1698 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AP001486.2-201ENST00000561652 5113 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 ZNF962P-201ENST00000443465 3140 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 RNU1-14P-201ENST00000362759 152 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AL034374.1-201ENST00000406329 351 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AL035696.2-201ENST00000407941 709 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 MTCYBP7-201ENST00000419540 1134 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AC073464.3-201ENST00000422564 712 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AC093716.1-201ENST00000435923 377 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AL138878.2-201ENST00000440581 1241 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 Z95152.1-201ENST00000453556 656 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 RPL36AP13-201ENST00000457490 317 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 VN1R84P-201ENST00000593697 235 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AL049844.2-201ENST00000604280 628 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AC024940.4-201ENST00000605507 246 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 Z82217.1-201ENST00000625157 8149 ntBASIC4.51□□□□□ -1.69
CCDC172P0C7W6 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC172P0C7W6 AL137100.1-201ENST00000556703 1620 ntBASIC4.5□□□□□ -1.69
CCDC172P0C7W6 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.5□□□□□ -1.69
CCDC172P0C7W6 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC172P0C7W6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC172P0C7W6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCDC172P0C7W6 RPS4XP9-201ENST00000405151 780 ntBASIC4.5□□□□□ -1.69
CCDC172P0C7W6 RN7SKP235-201ENST00000410662 305 ntBASIC4.5□□□□□ -1.69
CCDC172P0C7W6 AC069213.2-201ENST00000420238 366 ntBASIC4.5□□□□□ -1.69
CCDC172P0C7W6 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC172P0C7W6 BRWD1P3-201ENST00000428816 390 ntBASIC4.5□□□□□ -1.69
CCDC172P0C7W6 LYPLA1P1-201ENST00000434514 622 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms