Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.01□□□□□ -1.77
SEMA3DO95025 AC083899.3-201ENST00000603413 594 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 MIR6820-201ENST00000611508 62 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.01□□□□□ -1.77
SEMA3DO95025 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.01□□□□□ -1.77
SEMA3DO95025 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SEMA3DO95025 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.01□□□□□ -1.77
SEMA3DO95025 AC090229.1-201ENST00000590983 1609 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SEMA3DO95025 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SEMA3DO95025 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SEMA3DO95025 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SEMA3DO95025 AC083899.2-201ENST00000423285 1376 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.01□□□□□ -1.77
SEMA3DO95025 FAM35DP-201ENST00000323387 2712 ntBASIC4.01□□□□□ -1.77
SEMA3DO95025 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4□□□□□ -1.77
SEMA3DO95025 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4□□□□□ -1.77
SEMA3DO95025 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SEMA3DO95025 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4□□□□□ -1.77
SEMA3DO95025 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SEMA3DO95025 RNU4-39P-201ENST00000362455 127 ntBASIC4□□□□□ -1.77
SEMA3DO95025 RNA5SP388-201ENST00000362584 119 ntBASIC4□□□□□ -1.77
SEMA3DO95025 RNU1-132P-201ENST00000364300 164 ntBASIC4□□□□□ -1.77
SEMA3DO95025 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4□□□□□ -1.77
SEMA3DO95025 RNA5SP306-201ENST00000411087 107 ntBASIC4□□□□□ -1.77
SEMA3DO95025 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4□□□□□ -1.77
SEMA3DO95025 NRBF2P2-201ENST00000413087 861 ntBASIC4□□□□□ -1.77
SEMA3DO95025 RPL7P53-201ENST00000421245 739 ntBASIC4□□□□□ -1.77
SEMA3DO95025 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4□□□□□ -1.77
SEMA3DO95025 DNAJC19P7-201ENST00000428811 344 ntBASIC4□□□□□ -1.77
SEMA3DO95025 RPL7P4-203ENST00000430239 730 ntBASIC4□□□□□ -1.77
SEMA3DO95025 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4□□□□□ -1.77
SEMA3DO95025 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4□□□□□ -1.77
SEMA3DO95025 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4□□□□□ -1.77
SEMA3DO95025 OR7L1P-201ENST00000456181 380 ntBASIC4□□□□□ -1.77
SEMA3DO95025 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4□□□□□ -1.77
SEMA3DO95025 RNA5SP246-201ENST00000458909 119 ntBASIC4□□□□□ -1.77
SEMA3DO95025 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4□□□□□ -1.77
SEMA3DO95025 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4□□□□□ -1.77
SEMA3DO95025 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4□□□□□ -1.77
SEMA3DO95025 MIR2114-201ENST00000516645 80 ntBASIC4□□□□□ -1.77
SEMA3DO95025 AC105233.3-201ENST00000531125 744 ntBASIC4□□□□□ -1.77
SEMA3DO95025 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4□□□□□ -1.77
SEMA3DO95025 CR383656.6-201ENST00000550518 394 ntBASIC4□□□□□ -1.77
SEMA3DO95025 PSMB7P1-201ENST00000556349 514 ntBASIC4□□□□□ -1.77
SEMA3DO95025 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4□□□□□ -1.77
SEMA3DO95025 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4□□□□□ -1.77
SEMA3DO95025 AC020914.4-201ENST00000597690 277 ntBASIC4□□□□□ -1.77
SEMA3DO95025 AC068790.4-201ENST00000602474 263 ntBASIC4□□□□□ -1.77
SEMA3DO95025 AL161729.3-201ENST00000603533 673 ntBASIC4□□□□□ -1.77
SEMA3DO95025 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4□□□□□ -1.77
SEMA3DO95025 AC103858.2-201ENST00000621471 543 ntBASIC4□□□□□ -1.77
SEMA3DO95025 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4□□□□□ -1.77
SEMA3DO95025 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
SEMA3DO95025 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4□□□□□ -1.77
SEMA3DO95025 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4□□□□□ -1.77
SEMA3DO95025 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4□□□□□ -1.77
SEMA3DO95025 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SEMA3DO95025 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SEMA3DO95025 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.99□□□□□ -1.77
SEMA3DO95025 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SEMA3DO95025 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.99□□□□□ -1.77
SEMA3DO95025 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SEMA3DO95025 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.99□□□□□ -1.77
SEMA3DO95025 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SEMA3DO95025 IGKV7-3-201ENST00000357453 298 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 RNA5SP366-201ENST00000365454 123 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.99□□□□□ -1.77
SEMA3DO95025 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.99□□□□□ -1.77
SEMA3DO95025 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.99□□□□□ -1.77
SEMA3DO95025 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SEMA3DO95025 RNU4-25P-201ENST00000410569 230 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 RN7SKP182-201ENST00000410772 298 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 AMD1P2-201ENST00000412936 992 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 JKAMPP1-201ENST00000413804 919 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 TRIM60P17-201ENST00000415181 719 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 BTF3P10-201ENST00000433415 495 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.99□□□□□ -1.77
SEMA3DO95025 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SEMA3DO95025 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.99□□□□□ -1.77
SEMA3DO95025 HMGB1P16-201ENST00000447155 540 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 EIF2S2P2-201ENST00000447161 982 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.99□□□□□ -1.77
SEMA3DO95025 FCF1P7-201ENST00000451185 558 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 RPL23AP71-201ENST00000470966 469 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 AC093840.1-201ENST00000511599 336 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.99□□□□□ -1.77
SEMA3DO95025 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.99□□□□□ -1.77
SEMA3DO95025 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.99□□□□□ -1.77
SEMA3DO95025 AL121890.3-201ENST00000618494 516 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 AL713922.2-201ENST00000619384 716 ntBASIC3.99□□□□□ -1.77
SEMA3DO95025 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.99□□□□□ -1.77
SEMA3DO95025 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SEMA3DO95025 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SEMA3DO95025 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SEMA3DO95025 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SEMA3DO95025 CASC19-284ENST00000642142 1868 ntBASIC3.98□□□□□ -1.77
SEMA3DO95025 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEMA3DO95025 ZNF962P-201ENST00000443465 3140 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms